Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
ZFYVE28Q9HCC9 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
ZFYVE28Q9HCC9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.06□□□□□ -2.08
ZFYVE28Q9HCC9 MIR494-201ENST00000349529 81 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 Y_RNA.224-201ENST00000364308 111 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 RNA5SP160-201ENST00000364866 120 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 SNORD116-22-201ENST00000384430 92 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 RNU6-613P-201ENST00000410412 108 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 RNA5SP489-201ENST00000410986 109 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 IGLL4P-201ENST00000614590 133 ntBASIC2.05□□□□□ -2.08
ZFYVE28Q9HCC9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 MIR30D-201ENST00000362283 70 ntBASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 Y_RNA.168-201ENST00000363740 102 ntBASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 RNU1-98P-201ENST00000458992 160 ntBASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
ZFYVE28Q9HCC9 MIR377-201ENST00000362145 69 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 Y_RNA.173-201ENST00000363776 113 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 MT-TF-201ENST00000387314 71 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 Y_RNA.593-201ENST00000410292 98 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 SEPT14P17-201ENST00000617978 177 ntBASIC2.03□□□□□ -2.08
ZFYVE28Q9HCC9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-1125P-201ENST00000363601 107 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-1244P-201ENST00000363614 108 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 RNY1P1-201ENST00000364372 112 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 Y_RNA.327-201ENST00000365201 102 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-480P-201ENST00000384332 107 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 RNU1-78P-201ENST00000391248 165 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
ZFYVE28Q9HCC9 HSBP1P2-201ENST00000299671 229 ntBASIC2.01□□□□□ -2.09
ZFYVE28Q9HCC9 RNA5SP173-201ENST00000364857 136 ntBASIC2.01□□□□□ -2.09
ZFYVE28Q9HCC9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ZFYVE28Q9HCC9 AC138749.4-201ENST00000563970 127 ntBASIC2.01□□□□□ -2.09
ZFYVE28Q9HCC9 MIR4500-201ENST00000579472 76 ntBASIC2.01□□□□□ -2.09
ZFYVE28Q9HCC9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-654P-201ENST00000364373 107 ntBASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-580P-201ENST00000365159 107 ntBASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 MIR1276-201ENST00000408707 83 ntBASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-165P-201ENST00000517170 99 ntBASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 U6.109-201ENST00000636749 87 ntBASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ZFYVE28Q9HCC9 AC008834.1-201ENST00000511612 175 ntBASIC1.99□□□□□ -2.09
ZFYVE28Q9HCC9 AC090897.1-201ENST00000580909 226 ntBASIC1.99□□□□□ -2.09
ZFYVE28Q9HCC9 MIR4422-201ENST00000581938 83 ntBASIC1.99□□□□□ -2.09
ZFYVE28Q9HCC9 MIR6504-201ENST00000613520 61 ntBASIC1.99□□□□□ -2.09
ZFYVE28Q9HCC9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.98□□□□□ -2.09
ZFYVE28Q9HCC9 RNA5SP133-201ENST00000363368 119 ntBASIC1.98□□□□□ -2.09
ZFYVE28Q9HCC9 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-392P-201ENST00000364926 101 ntBASIC1.98□□□□□ -2.09
ZFYVE28Q9HCC9 MIR18B-201ENST00000454574 71 ntBASIC1.98□□□□□ -2.09
ZFYVE28Q9HCC9 SNORD53B-201ENST00000577887 78 ntBASIC1.98□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-1152P-201ENST00000384576 107 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 SNORA2B-201ENST00000384583 137 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 MIR181B2-201ENST00000385004 89 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 RNA5SP95-201ENST00000410319 137 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-402P-201ENST00000410678 103 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.97□□□□□ -2.09
ZFYVE28Q9HCC9 RNU6-573P-201ENST00000383938 106 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 RN7SKP88-201ENST00000516847 250 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 MIR4668-201ENST00000582284 70 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 7SK.8-201ENST00000612110 250 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 uc_338.6-201ENST00000613544 171 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 7SK.11-201ENST00000615477 250 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 7SK.13-201ENST00000622040 250 ntBASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
ZFYVE28Q9HCC9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 RNU6-675P-201ENST00000384236 104 ntBASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 MIR934-201ENST00000401241 83 ntBASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 SNORD93-201ENST00000408813 74 ntBASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.95□□□□□ -2.1
ZFYVE28Q9HCC9 RNY1P4-201ENST00000384595 115 ntBASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 AC048334.1-201ENST00000477975 159 ntBASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 AC022137.1-201ENST00000483735 151 ntBASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 AL513043.2-201ENST00000573941 143 ntBASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 MIR8066-201ENST00000617280 78 ntBASIC1.94□□□□□ -2.1
ZFYVE28Q9HCC9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 RNU1-42P-201ENST00000364033 160 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 RNU6-53P-201ENST00000365367 106 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 RNU6-571P-201ENST00000384128 107 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 RNU6-242P-201ENST00000384359 107 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 Y_RNA.609-201ENST00000410669 89 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 Y_RNA.620-201ENST00000411009 88 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 RNU6-592P-201ENST00000411333 103 ntBASIC1.93□□□□□ -2.1
ZFYVE28Q9HCC9 RPS27P16-201ENST00000425758 201 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms