Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNU4-83P-201ENST00000410863 133 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 RNU7-85P-201ENST00000458851 63 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 SUB1P4-201ENST00000566062 339 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 AP001362.1-201ENST00000625165 124 ntBASIC1.77□□□□□ -2.13
CHFRQ96EP1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 SNORD38.2-201ENST00000384470 69 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 RNU6-1237P-201ENST00000384777 107 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 MIR1236-201ENST00000408340 102 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 SCARNA18B-201ENST00000458806 135 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.76□□□□□ -2.13
CHFRQ96EP1 MIR548AO-201ENST00000579992 96 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 AC008133.2-201ENST00000624540 351 ntBASIC1.76□□□□□ -2.13
CHFRQ96EP1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.76□□□□□ -2.13
CHFRQ96EP1 RNU4-32P-201ENST00000363404 141 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 RNU6-112P-201ENST00000363599 104 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 MIR3134-201ENST00000579433 74 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.75□□□□□ -2.13
CHFRQ96EP1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CHFRQ96EP1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 MIR520A-201ENST00000384862 85 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CHFRQ96EP1 RNU7-95P-201ENST00000459222 64 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 AC005908.1-201ENST00000468701 347 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 AC141846.1-201ENST00000568348 142 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 MIR4709-201ENST00000577272 72 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 MIR4764-201ENST00000580680 88 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 AL359821.1-201ENST00000605519 182 ntBASIC1.74□□□□□ -2.13
CHFRQ96EP1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CHFRQ96EP1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
CHFRQ96EP1 MIR424-201ENST00000362227 98 ntBASIC1.73□□□□□ -2.13
CHFRQ96EP1 MIRLET7A1-201ENST00000362295 80 ntBASIC1.73□□□□□ -2.13
CHFRQ96EP1 RNU6-1094P-201ENST00000362416 104 ntBASIC1.73□□□□□ -2.13
CHFRQ96EP1 RNU6-590P-201ENST00000365039 107 ntBASIC1.73□□□□□ -2.13
CHFRQ96EP1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CHFRQ96EP1 RNA5SP445-201ENST00000515889 115 ntBASIC1.73□□□□□ -2.13
CHFRQ96EP1 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
CHFRQ96EP1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CHFRQ96EP1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CHFRQ96EP1 SNORA63.2-201ENST00000362603 126 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 Y_RNA.532-201ENST00000384590 113 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 SNRPGP12-201ENST00000449481 213 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 snoU13.27-201ENST00000459278 104 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 RNU7-43P-201ENST00000516554 64 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 RNU6-557P-201ENST00000516842 110 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 CYP3A52P-201ENST00000563326 91 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 AC090897.1-201ENST00000580909 226 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 MIR8066-201ENST00000617280 78 ntBASIC1.72□□□□□ -2.13
CHFRQ96EP1 AP000648.3-201ENST00000623539 4507 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 RNY1P2-201ENST00000364820 117 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 RNA5SP481-201ENST00000516814 122 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 MIR8074-201ENST00000615081 81 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 MIR8070-201ENST00000616510 88 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.71□□□□□ -2.14
CHFRQ96EP1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
CHFRQ96EP1 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CHFRQ96EP1 AC244023.1-201ENST00000426884 112 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 snoU13.11-201ENST00000459219 104 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 RNU7-41P-201ENST00000515917 61 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 AC138749.4-201ENST00000563970 127 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 AC242498.1-201ENST00000604134 111 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 AL662814.1-201ENST00000617364 121 ntBASIC1.7□□□□□ -2.14
CHFRQ96EP1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CHFRQ96EP1 RNU6-161P-201ENST00000363051 106 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 RNU6-686P-201ENST00000364839 107 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 RNU6-949P-201ENST00000384040 107 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 MIR520C-201ENST00000385005 87 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CHFRQ96EP1 RNA5SP292-201ENST00000390974 118 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 TRMT112P2-201ENST00000512910 132 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 RNU6-539P-201ENST00000516665 103 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 RNU6-850P-201ENST00000516934 103 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 AC133485.1-201ENST00000567176 124 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 MIR4796-201ENST00000580742 81 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 MIR4251-201ENST00000635819 61 ntBASIC1.69□□□□□ -2.14
CHFRQ96EP1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHFRQ96EP1 WWP1P1-201ENST00000466609 2769 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 MIR1287-201ENST00000408492 90 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 AC027119.1-201ENST00000440877 241 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 AC009474.2-201ENST00000451383 136 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 snoU13.9-201ENST00000458927 103 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 RNU6-1015P-201ENST00000517121 99 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
CHFRQ96EP1 MIR4500-201ENST00000579472 76 ntBASIC1.68□□□□□ -2.14
CHFRQ96EP1 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
CHFRQ96EP1 MIR520H-201ENST00000385126 88 ntBASIC1.67□□□□□ -2.14
CHFRQ96EP1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms