Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SIX5Q8N196 SNORD78.1-201ENST00000390866 65 ntBASIC2.16□□□□□ -2.06
SIX5Q8N196 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
SIX5Q8N196 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.16□□□□□ -2.06
SIX5Q8N196 SNRPGP12-201ENST00000449481 213 ntBASIC2.16□□□□□ -2.06
SIX5Q8N196 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.16□□□□□ -2.06
SIX5Q8N196 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.16□□□□□ -2.06
SIX5Q8N196 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 Y_RNA.330-201ENST00000365230 109 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 Y_RNA.426-201ENST00000384068 113 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 RNU6-571P-201ENST00000384128 107 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SIX5Q8N196 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 Y_RNA.611-201ENST00000410682 108 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 RN7SKP88-201ENST00000516847 250 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 RNU6-165P-201ENST00000517170 99 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 snoU13.31-201ENST00000607291 104 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 7SK.8-201ENST00000612110 250 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 uc_338.6-201ENST00000613544 171 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 7SK.11-201ENST00000615477 250 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 7SK.13-201ENST00000622040 250 ntBASIC2.15□□□□□ -2.07
SIX5Q8N196 SNORA72.6-201ENST00000384520 129 ntBASIC2.14□□□□□ -2.07
SIX5Q8N196 BX276092.1-201ENST00000427368 251 ntBASIC2.14□□□□□ -2.07
SIX5Q8N196 AL161932.1-201ENST00000437408 146 ntBASIC2.14□□□□□ -2.07
SIX5Q8N196 RNU6-850P-201ENST00000516934 103 ntBASIC2.14□□□□□ -2.07
SIX5Q8N196 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
SIX5Q8N196 MIR4422-201ENST00000581938 83 ntBASIC2.14□□□□□ -2.07
SIX5Q8N196 RNU4-58P-201ENST00000363192 141 ntBASIC2.13□□□□□ -2.07
SIX5Q8N196 RNU6-580P-201ENST00000365159 107 ntBASIC2.13□□□□□ -2.07
SIX5Q8N196 SNORA17.3-201ENST00000391159 129 ntBASIC2.13□□□□□ -2.07
SIX5Q8N196 RNU6-519P-201ENST00000410590 108 ntBASIC2.13□□□□□ -2.07
SIX5Q8N196 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
SIX5Q8N196 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SIX5Q8N196 MIR378A-201ENST00000362177 66 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 MIR337-201ENST00000362281 93 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 RNU6-403P-201ENST00000363163 104 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 Y_RNA.191-201ENST00000363972 113 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 RNU6-1124P-201ENST00000384169 107 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 Y_RNA.508-201ENST00000384502 114 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 RNU6-1275P-201ENST00000391087 107 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 AC008834.1-201ENST00000511612 175 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 Y_RNA.685-201ENST00000516532 108 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SIX5Q8N196 AC008163.1-202ENST00000636004 2889 ntBASIC2.12□□□□□ -2.07
SIX5Q8N196 RNU6-633P-201ENST00000362612 103 ntBASIC2.11□□□□□ -2.07
SIX5Q8N196 RNU6-509P-201ENST00000363519 107 ntBASIC2.11□□□□□ -2.07
SIX5Q8N196 RNU6-979P-201ENST00000383896 107 ntBASIC2.11□□□□□ -2.07
SIX5Q8N196 MIR4491-201ENST00000581087 68 ntBASIC2.11□□□□□ -2.07
SIX5Q8N196 AC020891.4-201ENST00000605745 93 ntBASIC2.11□□□□□ -2.07
SIX5Q8N196 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
SIX5Q8N196 AC023934.1-201ENST00000574529 2389 ntBASIC2.1□□□□□ -2.07
SIX5Q8N196 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SIX5Q8N196 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
SIX5Q8N196 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
SIX5Q8N196 MIR1257-201ENST00000408490 117 ntBASIC2.1□□□□□ -2.07
SIX5Q8N196 AC048334.1-201ENST00000477975 159 ntBASIC2.1□□□□□ -2.07
SIX5Q8N196 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
SIX5Q8N196 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SIX5Q8N196 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SIX5Q8N196 ZNF355P-201ENST00000427301 3216 ntBASIC2.09□□□□□ -2.07
SIX5Q8N196 RNU1-36P-201ENST00000365130 165 ntBASIC2.09□□□□□ -2.07
SIX5Q8N196 RNU4-83P-201ENST00000410863 133 ntBASIC2.09□□□□□ -2.07
SIX5Q8N196 SNORA31.2-201ENST00000516019 134 ntBASIC2.09□□□□□ -2.07
SIX5Q8N196 RNU6-531P-201ENST00000516694 104 ntBASIC2.09□□□□□ -2.07
SIX5Q8N196 MIR548BB-201ENST00000626714 66 ntBASIC2.09□□□□□ -2.07
SIX5Q8N196 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SIX5Q8N196 RNU6-1054P-201ENST00000411293 104 ntBASIC2.08□□□□□ -2.08
SIX5Q8N196 RPS27P16-201ENST00000425758 201 ntBASIC2.08□□□□□ -2.08
SIX5Q8N196 RNU6-638P-201ENST00000516582 104 ntBASIC2.08□□□□□ -2.08
SIX5Q8N196 SNORA25.16-201ENST00000516741 121 ntBASIC2.08□□□□□ -2.08
SIX5Q8N196 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.08□□□□□ -2.08
SIX5Q8N196 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SIX5Q8N196 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIX5Q8N196 MIR101-2-201ENST00000362195 79 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 SNORD115-37-201ENST00000363768 82 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 SNORD113.3-201ENST00000364630 78 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 Y_RNA.355-201ENST00000365462 98 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 RNU6-321P-201ENST00000410912 106 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 RNU7-185P-201ENST00000459215 60 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 RNU7-171P-201ENST00000459581 62 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 AC023790.1-201ENST00000482174 347 ntBASIC2.07□□□□□ -2.08
SIX5Q8N196 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.07□□□□□ -2.08
SIX5Q8N196 RNU6-228P-201ENST00000362700 106 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 Y_RNA.437-201ENST00000384113 113 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 MIR499A-201ENST00000384903 122 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 MIR519C-201ENST00000385053 87 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 RNA5SP338-201ENST00000410495 85 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 SNORD83.1-201ENST00000411362 77 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 AL512598.1-201ENST00000610158 273 ntBASIC2.06□□□□□ -2.08
SIX5Q8N196 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
SIX5Q8N196 RNA5SP190-201ENST00000365222 118 ntBASIC2.05□□□□□ -2.08
SIX5Q8N196 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.05□□□□□ -2.08
SIX5Q8N196 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.05□□□□□ -2.08
SIX5Q8N196 MIR8070-201ENST00000616510 88 ntBASIC2.05□□□□□ -2.08
SIX5Q8N196 AC006160.2-201ENST00000637708 154 ntBASIC2.05□□□□□ -2.08
SIX5Q8N196 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
SIX5Q8N196 RNU6-934P-201ENST00000365154 107 ntBASIC2.04□□□□□ -2.08
SIX5Q8N196 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
SIX5Q8N196 RNU6-243P-201ENST00000391140 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms