Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MIR196B-201ENST00000384852 84 ntBASIC3.09□□□□□ -1.91
NUBP1P53384 MTND4LP1-201ENST00000446263 157 ntBASIC3.09□□□□□ -1.91
NUBP1P53384 MIR4425-201ENST00000580572 84 ntBASIC3.09□□□□□ -1.91
NUBP1P53384 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.09□□□□□ -1.92
NUBP1P53384 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.09□□□□□ -1.92
NUBP1P53384 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NUBP1P53384 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.08□□□□□ -1.92
NUBP1P53384 SNORA16B-201ENST00000364674 135 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 RNU6-934P-201ENST00000365154 107 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 RNU6-382P-201ENST00000365181 106 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 SNORD115-44-201ENST00000365391 82 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 SNORA6-201ENST00000384033 151 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NUBP1P53384 RNA5SP492-201ENST00000411330 114 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 AC087499.2-201ENST00000432861 149 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 AL691482.2-201ENST00000457453 84 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 SNORA31.11-201ENST00000516528 139 ntBASIC3.08□□□□□ -1.92
NUBP1P53384 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUBP1P53384 MIR125B2-201ENST00000385128 89 ntBASIC3.07□□□□□ -1.92
NUBP1P53384 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NUBP1P53384 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
NUBP1P53384 SNORD83.1-201ENST00000411362 77 ntBASIC3.07□□□□□ -1.92
NUBP1P53384 SNORA77B-201ENST00000578179 125 ntBASIC3.07□□□□□ -1.92
NUBP1P53384 MIR3664-201ENST00000579074 99 ntBASIC3.07□□□□□ -1.92
NUBP1P53384 AL078603.1-201ENST00000603824 313 ntBASIC3.07□□□□□ -1.92
NUBP1P53384 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUBP1P53384 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.07□□□□□ -1.92
NUBP1P53384 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NUBP1P53384 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NUBP1P53384 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.06□□□□□ -1.92
NUBP1P53384 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUBP1P53384 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
NUBP1P53384 RNU6-482P-201ENST00000391068 107 ntBASIC3.06□□□□□ -1.92
NUBP1P53384 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.06□□□□□ -1.92
NUBP1P53384 MIR8074-201ENST00000615081 81 ntBASIC3.06□□□□□ -1.92
NUBP1P53384 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NUBP1P53384 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NUBP1P53384 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NUBP1P53384 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUBP1P53384 MIR9-1-201ENST00000385198 89 ntBASIC3.05□□□□□ -1.92
NUBP1P53384 MIR4738-201ENST00000579134 87 ntBASIC3.05□□□□□ -1.92
NUBP1P53384 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUBP1P53384 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.04□□□□□ -1.92
NUBP1P53384 SNORD113.3-201ENST00000364630 78 ntBASIC3.04□□□□□ -1.92
NUBP1P53384 RNU6-535P-201ENST00000384722 107 ntBASIC3.04□□□□□ -1.92
NUBP1P53384 RNU6-287P-201ENST00000516230 98 ntBASIC3.04□□□□□ -1.92
NUBP1P53384 AC079600.2-201ENST00000550076 130 ntBASIC3.04□□□□□ -1.92
NUBP1P53384 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUBP1P53384 AC009487.2-201ENST00000420969 6821 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 RNA5SP276-201ENST00000362580 94 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 RNU6-668P-201ENST00000364180 107 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 RNU6-1187P-201ENST00000364771 110 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 RNU6-805P-201ENST00000365643 106 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 SNORA67.3-201ENST00000384366 140 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 MIR216B-201ENST00000390186 82 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 SNORD109B-201ENST00000458961 67 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 SNORD109A-201ENST00000459128 67 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 snoU13.21-201ENST00000459368 105 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 AC055731.1-201ENST00000474387 401 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 SNORD53-201ENST00000579969 78 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 AC103810.8-201ENST00000607347 118 ntBASIC3.03□□□□□ -1.92
NUBP1P53384 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUBP1P53384 VTRNA1-1-201ENST00000363120 99 ntBASIC3.02□□□□□ -1.93
NUBP1P53384 MIR4771-2-201ENST00000577758 74 ntBASIC3.02□□□□□ -1.93
NUBP1P53384 MIR4771-1-201ENST00000582617 74 ntBASIC3.02□□□□□ -1.93
NUBP1P53384 MIR8063-201ENST00000621930 81 ntBASIC3.02□□□□□ -1.93
NUBP1P53384 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUBP1P53384 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUBP1P53384 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUBP1P53384 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
NUBP1P53384 RN7SL442P-201ENST00000473804 320 ntBASIC3.01□□□□□ -1.93
NUBP1P53384 AC008413.1-201ENST00000511864 177 ntBASIC3.01□□□□□ -1.93
NUBP1P53384 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUBP1P53384 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NUBP1P53384 RNU6-859P-201ENST00000362728 107 ntBASIC3□□□□□ -1.93
NUBP1P53384 AL603825.1-201ENST00000438481 80 ntBASIC3□□□□□ -1.93
NUBP1P53384 RNU6-542P-201ENST00000516405 103 ntBASIC3□□□□□ -1.93
NUBP1P53384 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.99□□□□□ -1.93
NUBP1P53384 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NUBP1P53384 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NUBP1P53384 RNU6-364P-201ENST00000384387 107 ntBASIC2.99□□□□□ -1.93
NUBP1P53384 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.99□□□□□ -1.93
NUBP1P53384 RNA5SP247-201ENST00000411181 105 ntBASIC2.99□□□□□ -1.93
NUBP1P53384 AC008608.1-201ENST00000603910 127 ntBASIC2.99□□□□□ -1.93
NUBP1P53384 AL645939.4-201ENST00000604495 135 ntBASIC2.99□□□□□ -1.93
NUBP1P53384 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUBP1P53384 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NUBP1P53384 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUBP1P53384 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUBP1P53384 SNORD33-201ENST00000362761 85 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 Y_RNA.258-201ENST00000364613 105 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 SNORA9.2-201ENST00000365361 133 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 SNORD75.2-201ENST00000408784 58 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 RNU6-977P-201ENST00000516411 103 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 AC015712.3-201ENST00000559380 164 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 AL773524.1-201ENST00000614065 229 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 AL109933.3-201ENST00000619095 188 ntBASIC2.98□□□□□ -1.93
NUBP1P53384 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUBP1P53384 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.98□□□□□ -1.93
NUBP1P53384 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms