Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 AC245166.1-201ENST00000521012 253 ntBASIC3.74□□□□□ -1.81
NPM3O75607 MIR3938-201ENST00000582157 103 ntBASIC3.74□□□□□ -1.81
NPM3O75607 MIR3657-201ENST00000584818 117 ntBASIC3.74□□□□□ -1.81
NPM3O75607 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPM3O75607 RNU6-369P-201ENST00000362515 102 ntBASIC3.73□□□□□ -1.81
NPM3O75607 RNU6-936P-201ENST00000384005 107 ntBASIC3.73□□□□□ -1.81
NPM3O75607 RNU6-1065P-201ENST00000384513 106 ntBASIC3.73□□□□□ -1.81
NPM3O75607 SNORD15B-201ENST00000384714 146 ntBASIC3.73□□□□□ -1.81
NPM3O75607 AC245884.12-201ENST00000615364 59 ntBASIC3.73□□□□□ -1.81
NPM3O75607 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPM3O75607 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPM3O75607 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPM3O75607 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPM3O75607 MIR30E-201ENST00000362104 92 ntBASIC3.72□□□□□ -1.81
NPM3O75607 RNU6-446P-201ENST00000362827 106 ntBASIC3.72□□□□□ -1.81
NPM3O75607 RNU6-122P-201ENST00000516818 107 ntBASIC3.72□□□□□ -1.81
NPM3O75607 AL033523.1-201ENST00000605153 153 ntBASIC3.72□□□□□ -1.81
NPM3O75607 MIR548O2-201ENST00000616090 70 ntBASIC3.72□□□□□ -1.81
NPM3O75607 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPM3O75607 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NPM3O75607 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPM3O75607 MIR617-201ENST00000385030 97 ntBASIC3.71□□□□□ -1.82
NPM3O75607 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.71□□□□□ -1.82
NPM3O75607 SNORD23.1-201ENST00000408212 104 ntBASIC3.71□□□□□ -1.82
NPM3O75607 RNU1-41P-201ENST00000516161 162 ntBASIC3.71□□□□□ -1.82
NPM3O75607 RNU1-48P-201ENST00000516400 162 ntBASIC3.71□□□□□ -1.82
NPM3O75607 AL773524.1-201ENST00000614065 229 ntBASIC3.71□□□□□ -1.82
NPM3O75607 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NPM3O75607 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPM3O75607 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPM3O75607 SNORA71.1-201ENST00000364523 117 ntBASIC3.7□□□□□ -1.82
NPM3O75607 RNU6-260P-201ENST00000384092 107 ntBASIC3.7□□□□□ -1.82
NPM3O75607 COTL1P1-201ENST00000422309 375 ntBASIC3.7□□□□□ -1.82
NPM3O75607 RNU7-102P-201ENST00000458948 62 ntBASIC3.7□□□□□ -1.82
NPM3O75607 MIR4713-201ENST00000582691 75 ntBASIC3.7□□□□□ -1.82
NPM3O75607 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPM3O75607 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NPM3O75607 RNU6-1184P-201ENST00000384588 108 ntBASIC3.69□□□□□ -1.82
NPM3O75607 AC079140.2-201ENST00000506193 142 ntBASIC3.69□□□□□ -1.82
NPM3O75607 MIR4425-201ENST00000580572 84 ntBASIC3.69□□□□□ -1.82
NPM3O75607 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
NPM3O75607 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPM3O75607 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.68□□□□□ -1.82
NPM3O75607 SUMO2P12-201ENST00000405924 140 ntBASIC3.68□□□□□ -1.82
NPM3O75607 snoU13.9-201ENST00000458927 103 ntBASIC3.68□□□□□ -1.82
NPM3O75607 RNU6-92P-201ENST00000605893 104 ntBASIC3.68□□□□□ -1.82
NPM3O75607 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.68□□□□□ -1.82
NPM3O75607 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPM3O75607 SNORD115-24-201ENST00000363528 82 ntBASIC3.67□□□□□ -1.82
NPM3O75607 RNA5SP403-201ENST00000363598 108 ntBASIC3.67□□□□□ -1.82
NPM3O75607 AC067940.1-201ENST00000458411 300 ntBASIC3.67□□□□□ -1.82
NPM3O75607 RNU7-40P-201ENST00000516397 64 ntBASIC3.67□□□□□ -1.82
NPM3O75607 MIR548AG2-201ENST00000581228 64 ntBASIC3.67□□□□□ -1.82
NPM3O75607 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.67□□□□□ -1.82
NPM3O75607 AC106800.4-201ENST00000614905 153 ntBASIC3.67□□□□□ -1.82
NPM3O75607 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.67□□□□□ -1.82
NPM3O75607 AC006386.2-201ENST00000624491 75 ntBASIC3.67□□□□□ -1.82
NPM3O75607 AC012005.1-201ENST00000624575 75 ntBASIC3.67□□□□□ -1.82
NPM3O75607 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.67□□□□□ -1.82
NPM3O75607 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPM3O75607 Y_RNA.174-201ENST00000363781 105 ntBASIC3.66□□□□□ -1.82
NPM3O75607 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPM3O75607 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPM3O75607 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.65□□□□□ -1.82
NPM3O75607 MIR22-201ENST00000362190 85 ntBASIC3.65□□□□□ -1.83
NPM3O75607 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPM3O75607 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPM3O75607 SNORA2.1-201ENST00000363089 137 ntBASIC3.64□□□□□ -1.83
NPM3O75607 SCARNA20.6-201ENST00000517251 106 ntBASIC3.64□□□□□ -1.83
NPM3O75607 AC019176.1-201ENST00000518519 225 ntBASIC3.64□□□□□ -1.83
NPM3O75607 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.64□□□□□ -1.83
NPM3O75607 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPM3O75607 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPM3O75607 RNU1-119P-201ENST00000391122 165 ntBASIC3.63□□□□□ -1.83
NPM3O75607 MIR3937-201ENST00000580135 106 ntBASIC3.63□□□□□ -1.83
NPM3O75607 MIR4513-201ENST00000581077 86 ntBASIC3.63□□□□□ -1.83
NPM3O75607 MIR7106-201ENST00000612419 65 ntBASIC3.63□□□□□ -1.83
NPM3O75607 MIR6852-201ENST00000621699 66 ntBASIC3.63□□□□□ -1.83
NPM3O75607 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPM3O75607 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPM3O75607 RNU6-851P-201ENST00000384565 107 ntBASIC3.62□□□□□ -1.83
NPM3O75607 SNORA11.2-201ENST00000408318 127 ntBASIC3.62□□□□□ -1.83
NPM3O75607 MIR2114-201ENST00000516645 80 ntBASIC3.62□□□□□ -1.83
NPM3O75607 AL359821.1-201ENST00000605519 182 ntBASIC3.62□□□□□ -1.83
NPM3O75607 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NPM3O75607 SNORD1A-201ENST00000364968 72 ntBASIC3.61□□□□□ -1.83
NPM3O75607 RNU6-54P-201ENST00000365563 107 ntBASIC3.61□□□□□ -1.83
NPM3O75607 RNU6-1089P-201ENST00000516473 104 ntBASIC3.61□□□□□ -1.83
NPM3O75607 RNU6-165P-201ENST00000517170 99 ntBASIC3.61□□□□□ -1.83
NPM3O75607 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.61□□□□□ -1.83
NPM3O75607 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPM3O75607 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
NPM3O75607 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.6□□□□□ -1.83
NPM3O75607 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPM3O75607 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NPM3O75607 MIR302D-201ENST00000362275 68 ntBASIC3.6□□□□□ -1.83
NPM3O75607 EEF1A1P41-201ENST00000414667 207 ntBASIC3.6□□□□□ -1.83
NPM3O75607 SNORA44.1-201ENST00000517031 108 ntBASIC3.6□□□□□ -1.83
NPM3O75607 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.6□□□□□ -1.83
NPM3O75607 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms