Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RNU1-36P-201ENST00000365130 165 ntBASIC2□□□□□ -2.09
PAX4O43316 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2□□□□□ -2.09
PAX4O43316 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
PAX4O43316 S100A11P2-201ENST00000467589 312 ntBASIC2□□□□□ -2.09
PAX4O43316 SCARNA13-201ENST00000516672 275 ntBASIC2□□□□□ -2.09
PAX4O43316 AL449363.1-201ENST00000617815 186 ntBASIC2□□□□□ -2.09
PAX4O43316 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
PAX4O43316 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
PAX4O43316 MIR101-2-201ENST00000362195 79 ntBASIC1.99□□□□□ -2.09
PAX4O43316 RNA5SP215-201ENST00000363440 122 ntBASIC1.99□□□□□ -2.09
PAX4O43316 RNU6-990P-201ENST00000364385 104 ntBASIC1.99□□□□□ -2.09
PAX4O43316 MIR128-1-201ENST00000384921 82 ntBASIC1.99□□□□□ -2.09
PAX4O43316 MIR599-201ENST00000385069 95 ntBASIC1.99□□□□□ -2.09
PAX4O43316 MIR483-201ENST00000385070 76 ntBASIC1.99□□□□□ -2.09
PAX4O43316 RNU6-1250P-201ENST00000391218 107 ntBASIC1.99□□□□□ -2.09
PAX4O43316 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.99□□□□□ -2.09
PAX4O43316 SNORD42B-201ENST00000458893 67 ntBASIC1.99□□□□□ -2.09
PAX4O43316 snoU13.21-201ENST00000459368 105 ntBASIC1.99□□□□□ -2.09
PAX4O43316 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.99□□□□□ -2.09
PAX4O43316 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PAX4O43316 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
PAX4O43316 MIR26A1-201ENST00000362205 77 ntBASIC1.98□□□□□ -2.09
PAX4O43316 Y_RNA.13-201ENST00000362403 112 ntBASIC1.98□□□□□ -2.09
PAX4O43316 SNORA48.2-201ENST00000390926 124 ntBASIC1.98□□□□□ -2.09
PAX4O43316 MIR1283-2-201ENST00000408621 87 ntBASIC1.98□□□□□ -2.09
PAX4O43316 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.98□□□□□ -2.09
PAX4O43316 MIR548AG2-201ENST00000581228 64 ntBASIC1.98□□□□□ -2.09
PAX4O43316 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.98□□□□□ -2.09
PAX4O43316 AC010297.1-201ENST00000623948 149 ntBASIC1.98□□□□□ -2.09
PAX4O43316 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PAX4O43316 Y_RNA.56-201ENST00000362798 112 ntBASIC1.97□□□□□ -2.09
PAX4O43316 RNU6-112P-201ENST00000363599 104 ntBASIC1.97□□□□□ -2.09
PAX4O43316 RNU6-54P-201ENST00000365563 107 ntBASIC1.97□□□□□ -2.09
PAX4O43316 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
PAX4O43316 RNU1-138P-201ENST00000384093 164 ntBASIC1.97□□□□□ -2.09
PAX4O43316 SNORA9-201ENST00000384215 133 ntBASIC1.97□□□□□ -2.09
PAX4O43316 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.97□□□□□ -2.09
PAX4O43316 AC087499.2-201ENST00000432861 149 ntBASIC1.97□□□□□ -2.09
PAX4O43316 AC097635.1-201ENST00000450678 155 ntBASIC1.97□□□□□ -2.09
PAX4O43316 snoU13.27-201ENST00000459278 104 ntBASIC1.97□□□□□ -2.09
PAX4O43316 SNORA74D-201ENST00000516404 141 ntBASIC1.97□□□□□ -2.09
PAX4O43316 RNA5SP137-201ENST00000516833 135 ntBASIC1.97□□□□□ -2.09
PAX4O43316 MIR548H5-201ENST00000580314 60 ntBASIC1.97□□□□□ -2.09
PAX4O43316 MIR3605-201ENST00000583214 100 ntBASIC1.97□□□□□ -2.09
PAX4O43316 AC103810.8-201ENST00000607347 118 ntBASIC1.97□□□□□ -2.09
PAX4O43316 U4.4-201ENST00000620626 117 ntBASIC1.97□□□□□ -2.09
PAX4O43316 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PAX4O43316 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.96□□□□□ -2.1
PAX4O43316 RNU6-986P-201ENST00000363133 102 ntBASIC1.96□□□□□ -2.1
PAX4O43316 RNU6-53P-201ENST00000365367 106 ntBASIC1.96□□□□□ -2.1
PAX4O43316 SNORA44-201ENST00000384584 132 ntBASIC1.96□□□□□ -2.1
PAX4O43316 SNORA41B-201ENST00000384785 128 ntBASIC1.96□□□□□ -2.1
PAX4O43316 MT-TF-201ENST00000387314 71 ntBASIC1.96□□□□□ -2.1
PAX4O43316 RNU11-3P-201ENST00000391111 133 ntBASIC1.96□□□□□ -2.1
PAX4O43316 RNU7-24P-201ENST00000458867 62 ntBASIC1.96□□□□□ -2.1
PAX4O43316 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.96□□□□□ -2.1
PAX4O43316 MIR3200-201ENST00000580767 85 ntBASIC1.96□□□□□ -2.1
PAX4O43316 MIR5194-201ENST00000582634 120 ntBASIC1.96□□□□□ -2.1
PAX4O43316 AL049779.4-201ENST00000604500 156 ntBASIC1.96□□□□□ -2.1
PAX4O43316 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.96□□□□□ -2.1
PAX4O43316 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PAX4O43316 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PAX4O43316 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PAX4O43316 RNU6-520P-201ENST00000384717 104 ntBASIC1.95□□□□□ -2.1
PAX4O43316 MIR520A-201ENST00000384862 85 ntBASIC1.95□□□□□ -2.1
PAX4O43316 SNORD41-201ENST00000386967 70 ntBASIC1.95□□□□□ -2.1
PAX4O43316 HMGN2P3-201ENST00000433603 273 ntBASIC1.95□□□□□ -2.1
PAX4O43316 HMGN2P5-201ENST00000436882 273 ntBASIC1.95□□□□□ -2.1
PAX4O43316 AL157398.1-201ENST00000452981 186 ntBASIC1.95□□□□□ -2.1
PAX4O43316 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.95□□□□□ -2.1
PAX4O43316 MIR6516-201ENST00000630554 81 ntBASIC1.95□□□□□ -2.1
PAX4O43316 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
PAX4O43316 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PAX4O43316 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PAX4O43316 U3.27-201ENST00000391237 200 ntBASIC1.94□□□□□ -2.1
PAX4O43316 COTL1P1-201ENST00000422309 375 ntBASIC1.94□□□□□ -2.1
PAX4O43316 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.94□□□□□ -2.1
PAX4O43316 RPS29P6-201ENST00000438196 145 ntBASIC1.94□□□□□ -2.1
PAX4O43316 AC003982.1-202ENST00000469928 248 ntBASIC1.94□□□□□ -2.1
PAX4O43316 RPL30P7-201ENST00000479312 323 ntBASIC1.94□□□□□ -2.1
PAX4O43316 SNORD111.1-201ENST00000516421 86 ntBASIC1.94□□□□□ -2.1
PAX4O43316 MIR4264-201ENST00000583520 66 ntBASIC1.94□□□□□ -2.1
PAX4O43316 MIR6082-201ENST00000613604 109 ntBASIC1.94□□□□□ -2.1
PAX4O43316 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PAX4O43316 SNORA67.1-201ENST00000364749 141 ntBASIC1.93□□□□□ -2.1
PAX4O43316 RNU6-396P-201ENST00000365369 105 ntBASIC1.93□□□□□ -2.1
PAX4O43316 MIR653-201ENST00000385279 96 ntBASIC1.93□□□□□ -2.1
PAX4O43316 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PAX4O43316 AL138827.1-201ENST00000402666 306 ntBASIC1.93□□□□□ -2.1
PAX4O43316 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.93□□□□□ -2.1
PAX4O43316 SNORA40.16-201ENST00000517238 121 ntBASIC1.93□□□□□ -2.1
PAX4O43316 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.93□□□□□ -2.1
PAX4O43316 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PAX4O43316 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PAX4O43316 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.92□□□□□ -2.1
PAX4O43316 MIR548C-201ENST00000384815 97 ntBASIC1.92□□□□□ -2.1
PAX4O43316 RNU7-26P-201ENST00000458980 63 ntBASIC1.92□□□□□ -2.1
PAX4O43316 RNU6-548P-201ENST00000517083 115 ntBASIC1.92□□□□□ -2.1
PAX4O43316 MIR3616-201ENST00000584070 92 ntBASIC1.92□□□□□ -2.1
PAX4O43316 MIR7106-201ENST00000612419 65 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms