Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 MIR21-201ENST00000362134 72 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 RNA5SP456-201ENST00000364002 114 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 RNA5SP493-201ENST00000364115 91 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 SNORD113-4-201ENST00000364802 75 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-949P-201ENST00000384040 107 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 RNU6-604P-201ENST00000390917 100 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 AL034345.1-201ENST00000407768 123 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 AL591806.2-201ENST00000433122 173 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 AC023141.11-201ENST00000508864 202 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 CYP3A52P-201ENST00000563326 91 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 AL662814.1-201ENST00000617364 121 ntBASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.09□□□□□ -1.91
PDZRN3Q9UPQ7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDZRN3Q9UPQ7 SNORD114-1-201ENST00000362705 72 ntBASIC3.08□□□□□ -1.92
PDZRN3Q9UPQ7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDZRN3Q9UPQ7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.08□□□□□ -1.92
PDZRN3Q9UPQ7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PDZRN3Q9UPQ7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDZRN3Q9UPQ7 AP000648.3-201ENST00000623539 4507 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 Y_RNA.119-201ENST00000363301 96 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 AC245517.4-201ENST00000448601 281 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 RNU7-26P-201ENST00000458980 63 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 RNU7-106P-201ENST00000459514 67 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 RNU6-1057P-201ENST00000517162 102 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 MIR3169-201ENST00000578032 83 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 U6.109-201ENST00000636749 87 ntBASIC3.07□□□□□ -1.92
PDZRN3Q9UPQ7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 MIR561-201ENST00000385216 97 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 AC019129.1-201ENST00000403786 261 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 RNA5SP237-201ENST00000410414 113 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 HMGN2P3-201ENST00000433603 273 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 HMGN2P5-201ENST00000436882 273 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 AL603825.1-201ENST00000438481 80 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 MIR4446-201ENST00000578505 67 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 MIR466-201ENST00000580653 84 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 MIR5194-201ENST00000582634 120 ntBASIC3.06□□□□□ -1.92
PDZRN3Q9UPQ7 RNA5SP393-201ENST00000363423 117 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 RNU1-51P-201ENST00000365345 176 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 HMGN2P39-201ENST00000398005 273 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 MIR1289-2-201ENST00000408360 111 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 RNU2-19P-201ENST00000517288 84 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 MIR3140-201ENST00000583685 90 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 U6.81-201ENST00000612550 106 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 MIR1291-201ENST00000627649 87 ntBASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PDZRN3Q9UPQ7 MIR660-201ENST00000385235 97 ntBASIC3.04□□□□□ -1.92
PDZRN3Q9UPQ7 MIR524-201ENST00000385242 87 ntBASIC3.04□□□□□ -1.92
PDZRN3Q9UPQ7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PDZRN3Q9UPQ7 AC121758.2-201ENST00000553271 193 ntBASIC3.04□□□□□ -1.92
PDZRN3Q9UPQ7 AL355297.2-201ENST00000604792 129 ntBASIC3.04□□□□□ -1.92
PDZRN3Q9UPQ7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDZRN3Q9UPQ7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.03□□□□□ -1.92
PDZRN3Q9UPQ7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.03□□□□□ -1.92
PDZRN3Q9UPQ7 RNU6-824P-201ENST00000363724 104 ntBASIC3.03□□□□□ -1.92
PDZRN3Q9UPQ7 MIR548AO-201ENST00000579992 96 ntBASIC3.03□□□□□ -1.92
PDZRN3Q9UPQ7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 SNORA67.1-201ENST00000364749 141 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 RNU1-138P-201ENST00000384093 164 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 SNORD38B-201ENST00000384690 67 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 MIR764-201ENST00000390811 85 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 SNORA11.4-201ENST00000408823 129 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 RNU4-88P-201ENST00000411220 86 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 SNORA74.3-201ENST00000517108 154 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 MIR5089-201ENST00000580047 84 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 SNORD38B-202ENST00000625943 69 ntBASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.02□□□□□ -1.93
PDZRN3Q9UPQ7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 RNY4P3-201ENST00000365254 95 ntBASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-1031P-201ENST00000384773 107 ntBASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 RNA5SP402-201ENST00000517148 110 ntBASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 AC008133.2-201ENST00000624540 351 ntBASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDZRN3Q9UPQ7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 RNA5SP192-201ENST00000364404 120 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 SNORD114-30-201ENST00000364448 72 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 SNORA25B-201ENST00000365507 128 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-220P-201ENST00000390919 107 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 AC097510.1-201ENST00000510945 133 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 MIR4658-201ENST00000584344 65 ntBASIC3□□□□□ -1.93
PDZRN3Q9UPQ7 SNORA25.5-201ENST00000363782 126 ntBASIC2.99□□□□□ -1.93
PDZRN3Q9UPQ7 AC011753.1-201ENST00000451001 220 ntBASIC2.99□□□□□ -1.93
PDZRN3Q9UPQ7 AC046143.2-201ENST00000609789 160 ntBASIC2.99□□□□□ -1.93
PDZRN3Q9UPQ7 AL096861.1-201ENST00000610899 123 ntBASIC2.99□□□□□ -1.93
PDZRN3Q9UPQ7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PDZRN3Q9UPQ7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-23P-201ENST00000363283 107 ntBASIC2.98□□□□□ -1.93
PDZRN3Q9UPQ7 SNORA24B-201ENST00000384176 131 ntBASIC2.98□□□□□ -1.93
PDZRN3Q9UPQ7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PDZRN3Q9UPQ7 AL049779.4-201ENST00000604500 156 ntBASIC2.98□□□□□ -1.93
PDZRN3Q9UPQ7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.98□□□□□ -1.93
PDZRN3Q9UPQ7 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.98□□□□□ -1.93
PDZRN3Q9UPQ7 RNU6-940P-201ENST00000363433 104 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms