Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 RNU6-1276P-201ENST00000365372 104 ntBASIC2.42□□□□□ -2.02
RFC5P40937 SNORD78.1-201ENST00000390866 65 ntBASIC2.42□□□□□ -2.02
RFC5P40937 Y_RNA.609-201ENST00000410669 89 ntBASIC2.42□□□□□ -2.02
RFC5P40937 AL356379.1-201ENST00000414105 126 ntBASIC2.42□□□□□ -2.02
RFC5P40937 AL513043.2-201ENST00000573941 143 ntBASIC2.42□□□□□ -2.02
RFC5P40937 AL161722.3-201ENST00000605789 2983 ntBASIC2.42□□□□□ -2.02
RFC5P40937 RNU6-497P-201ENST00000365316 104 ntBASIC2.41□□□□□ -2.02
RFC5P40937 AC245517.4-201ENST00000448601 281 ntBASIC2.41□□□□□ -2.02
RFC5P40937 MIR18B-201ENST00000454574 71 ntBASIC2.41□□□□□ -2.02
RFC5P40937 RPL23AP42-201ENST00000471152 471 ntBASIC2.41□□□□□ -2.02
RFC5P40937 RNU6-267P-201ENST00000516714 103 ntBASIC2.41□□□□□ -2.02
RFC5P40937 MIR8066-201ENST00000617280 78 ntBASIC2.41□□□□□ -2.02
RFC5P40937 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RFC5P40937 Y_RNA.119-201ENST00000363301 96 ntBASIC2.4□□□□□ -2.03
RFC5P40937 RNU6-1275P-201ENST00000391087 107 ntBASIC2.4□□□□□ -2.03
RFC5P40937 AL161932.1-201ENST00000437408 146 ntBASIC2.4□□□□□ -2.03
RFC5P40937 MIR5588-201ENST00000581890 63 ntBASIC2.4□□□□□ -2.03
RFC5P40937 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFC5P40937 RNU6-654P-201ENST00000364373 107 ntBASIC2.39□□□□□ -2.03
RFC5P40937 RNU6-580P-201ENST00000365159 107 ntBASIC2.39□□□□□ -2.03
RFC5P40937 RNU6-53P-201ENST00000365367 106 ntBASIC2.39□□□□□ -2.03
RFC5P40937 RNU6-571P-201ENST00000384128 107 ntBASIC2.39□□□□□ -2.03
RFC5P40937 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RFC5P40937 SNRPGP12-201ENST00000449481 213 ntBASIC2.39□□□□□ -2.03
RFC5P40937 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
RFC5P40937 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RFC5P40937 AC008163.1-202ENST00000636004 2889 ntBASIC2.39□□□□□ -2.03
RFC5P40937 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RFC5P40937 RNU6-979P-201ENST00000383896 107 ntBASIC2.38□□□□□ -2.03
RFC5P40937 Y_RNA.426-201ENST00000384068 113 ntBASIC2.38□□□□□ -2.03
RFC5P40937 SNORA64-201ENST00000384674 134 ntBASIC2.38□□□□□ -2.03
RFC5P40937 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.38□□□□□ -2.03
RFC5P40937 AL512310.8-201ENST00000550183 120 ntBASIC2.38□□□□□ -2.03
RFC5P40937 AC025521.1-201ENST00000621624 286 ntBASIC2.38□□□□□ -2.03
RFC5P40937 Y_RNA.57-201ENST00000362806 113 ntBASIC2.37□□□□□ -2.03
RFC5P40937 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RFC5P40937 AC079804.2-201ENST00000490376 200 ntBASIC2.37□□□□□ -2.03
RFC5P40937 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.37□□□□□ -2.03
RFC5P40937 MIR6840-201ENST00000611937 71 ntBASIC2.37□□□□□ -2.03
RFC5P40937 RNU6-633P-201ENST00000362612 103 ntBASIC2.36□□□□□ -2.03
RFC5P40937 RNU6-509P-201ENST00000363519 107 ntBASIC2.36□□□□□ -2.03
RFC5P40937 MIR1261-201ENST00000408659 82 ntBASIC2.36□□□□□ -2.03
RFC5P40937 SNORD93-201ENST00000408813 74 ntBASIC2.36□□□□□ -2.03
RFC5P40937 RNU6-850P-201ENST00000516934 103 ntBASIC2.36□□□□□ -2.03
RFC5P40937 RNU6-165P-201ENST00000517170 99 ntBASIC2.36□□□□□ -2.03
RFC5P40937 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.36□□□□□ -2.03
RFC5P40937 MIR5694-201ENST00000581190 76 ntBASIC2.36□□□□□ -2.03
RFC5P40937 MIR4422-201ENST00000581938 83 ntBASIC2.36□□□□□ -2.03
RFC5P40937 AL096840.1-201ENST00000603287 93 ntBASIC2.36□□□□□ -2.03
RFC5P40937 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
RFC5P40937 MIR676-201ENST00000390702 67 ntBASIC2.35□□□□□ -2.03
RFC5P40937 RNU1-78P-201ENST00000391248 165 ntBASIC2.35□□□□□ -2.03
RFC5P40937 RNA5SP95-201ENST00000410319 137 ntBASIC2.35□□□□□ -2.03
RFC5P40937 Y_RNA.611-201ENST00000410682 108 ntBASIC2.35□□□□□ -2.03
RFC5P40937 AC008834.1-201ENST00000511612 175 ntBASIC2.35□□□□□ -2.03
RFC5P40937 uc_338.6-201ENST00000613544 171 ntBASIC2.35□□□□□ -2.03
RFC5P40937 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
RFC5P40937 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RFC5P40937 RNU4-58P-201ENST00000363192 141 ntBASIC2.34□□□□□ -2.03
RFC5P40937 RNU6-1124P-201ENST00000384169 107 ntBASIC2.34□□□□□ -2.03
RFC5P40937 RNU6-1054P-201ENST00000411293 104 ntBASIC2.34□□□□□ -2.03
RFC5P40937 RNU7-171P-201ENST00000459581 62 ntBASIC2.34□□□□□ -2.03
RFC5P40937 RNU6-638P-201ENST00000516582 104 ntBASIC2.34□□□□□ -2.03
RFC5P40937 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.34□□□□□ -2.03
RFC5P40937 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RFC5P40937 RNU6-519P-201ENST00000410590 108 ntBASIC2.33□□□□□ -2.04
RFC5P40937 RNA5SP489-201ENST00000410986 109 ntBASIC2.33□□□□□ -2.04
RFC5P40937 BX276092.1-201ENST00000427368 251 ntBASIC2.33□□□□□ -2.04
RFC5P40937 RN7SKP88-201ENST00000516847 250 ntBASIC2.33□□□□□ -2.04
RFC5P40937 7SK.8-201ENST00000612110 250 ntBASIC2.33□□□□□ -2.04
RFC5P40937 7SK.11-201ENST00000615477 250 ntBASIC2.33□□□□□ -2.04
RFC5P40937 7SK.13-201ENST00000622040 250 ntBASIC2.33□□□□□ -2.04
RFC5P40937 ZNF355P-201ENST00000427301 3216 ntBASIC2.33□□□□□ -2.04
RFC5P40937 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFC5P40937 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFC5P40937 Y_RNA.4-201ENST00000362333 112 ntBASIC2.32□□□□□ -2.04
RFC5P40937 snoU13.15-201ENST00000459407 104 ntBASIC2.32□□□□□ -2.04
RFC5P40937 MIR4491-201ENST00000581087 68 ntBASIC2.32□□□□□ -2.04
RFC5P40937 AC104984.5-201ENST00000586878 94 ntBASIC2.32□□□□□ -2.04
RFC5P40937 AC020891.4-201ENST00000605745 93 ntBASIC2.32□□□□□ -2.04
RFC5P40937 MIR548BB-201ENST00000626714 66 ntBASIC2.32□□□□□ -2.04
RFC5P40937 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RFC5P40937 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFC5P40937 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFC5P40937 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFC5P40937 SNORD114-1-201ENST00000362705 72 ntBASIC2.31□□□□□ -2.04
RFC5P40937 Y_RNA.191-201ENST00000363972 113 ntBASIC2.31□□□□□ -2.04
RFC5P40937 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.31□□□□□ -2.04
RFC5P40937 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RFC5P40937 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
RFC5P40937 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.31□□□□□ -2.04
RFC5P40937 RNU6-228P-201ENST00000362700 106 ntBASIC2.3□□□□□ -2.04
RFC5P40937 RNU1-36P-201ENST00000365130 165 ntBASIC2.3□□□□□ -2.04
RFC5P40937 Y_RNA.330-201ENST00000365230 109 ntBASIC2.3□□□□□ -2.04
RFC5P40937 RNU4-83P-201ENST00000410863 133 ntBASIC2.3□□□□□ -2.04
RFC5P40937 snoU13.26-201ENST00000459452 105 ntBASIC2.3□□□□□ -2.04
RFC5P40937 AL512598.1-201ENST00000610158 273 ntBASIC2.3□□□□□ -2.04
RFC5P40937 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RFC5P40937 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFC5P40937 SNORD113.3-201ENST00000364630 78 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms