Protein–RNA interactions for Protein: P15918

RAG1, V(D)J recombination-activating protein 1, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1P15918 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
RAG1P15918 SNORD114-10-201ENST00000363409 72 ntBASIC1.9□□□□□ -2.11
RAG1P15918 MIR488-201ENST00000365739 83 ntBASIC1.9□□□□□ -2.11
RAG1P15918 MIR588-201ENST00000384900 83 ntBASIC1.9□□□□□ -2.11
RAG1P15918 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.9□□□□□ -2.11
RAG1P15918 MIR6504-201ENST00000613520 61 ntBASIC1.9□□□□□ -2.11
RAG1P15918 AC105081.1-201ENST00000617727 106 ntBASIC1.9□□□□□ -2.11
RAG1P15918 MIR2052-201ENST00000636055 55 ntBASIC1.9□□□□□ -2.11
RAG1P15918 MIR4679-1-201ENST00000637619 75 ntBASIC1.9□□□□□ -2.11
RAG1P15918 MIR103A2-201ENST00000362154 78 ntBASIC1.89□□□□□ -2.11
RAG1P15918 RNA5SP264-201ENST00000363115 107 ntBASIC1.89□□□□□ -2.11
RAG1P15918 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
RAG1P15918 RNU6-1131P-201ENST00000364955 107 ntBASIC1.89□□□□□ -2.11
RAG1P15918 Y_RNA.448-201ENST00000384185 108 ntBASIC1.89□□□□□ -2.11
RAG1P15918 MIR1276-201ENST00000408707 83 ntBASIC1.89□□□□□ -2.11
RAG1P15918 UBL5P1-201ENST00000507979 193 ntBASIC1.89□□□□□ -2.11
RAG1P15918 RNU6-795P-201ENST00000516323 103 ntBASIC1.89□□□□□ -2.11
RAG1P15918 MIR2115-201ENST00000516657 100 ntBASIC1.89□□□□□ -2.11
RAG1P15918 SNORD53B-201ENST00000577887 78 ntBASIC1.89□□□□□ -2.11
RAG1P15918 MIR4264-201ENST00000583520 66 ntBASIC1.89□□□□□ -2.11
RAG1P15918 SNORA4-201ENST00000584302 138 ntBASIC1.89□□□□□ -2.11
RAG1P15918 AC012531.4-201ENST00000616509 177 ntBASIC1.89□□□□□ -2.11
RAG1P15918 MIR6740-201ENST00000618268 113 ntBASIC1.89□□□□□ -2.11
RAG1P15918 MIR6516-201ENST00000630554 81 ntBASIC1.89□□□□□ -2.11
RAG1P15918 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RAG1P15918 RNU6-170P-201ENST00000362832 104 ntBASIC1.88□□□□□ -2.11
RAG1P15918 MIR563-201ENST00000385080 79 ntBASIC1.88□□□□□ -2.11
RAG1P15918 MT-TN-201ENST00000387400 73 ntBASIC1.88□□□□□ -2.11
RAG1P15918 RNU6-205P-201ENST00000390858 107 ntBASIC1.88□□□□□ -2.11
RAG1P15918 RNU6-1321P-201ENST00000390905 107 ntBASIC1.88□□□□□ -2.11
RAG1P15918 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.88□□□□□ -2.11
RAG1P15918 AL512310.8-201ENST00000550183 120 ntBASIC1.88□□□□□ -2.11
RAG1P15918 AP000753.3-201ENST00000604083 169 ntBASIC1.88□□□□□ -2.11
RAG1P15918 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.88□□□□□ -2.11
RAG1P15918 AC091304.10-201ENST00000641554 121 ntBASIC1.88□□□□□ -2.11
RAG1P15918 RNU6-392P-201ENST00000364926 101 ntBASIC1.87□□□□□ -2.11
RAG1P15918 RNU6-49P-201ENST00000384256 107 ntBASIC1.87□□□□□ -2.11
RAG1P15918 MIR34C-201ENST00000384831 77 ntBASIC1.87□□□□□ -2.11
RAG1P15918 AC004941.2-201ENST00000427009 228 ntBASIC1.87□□□□□ -2.11
RAG1P15918 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.87□□□□□ -2.11
RAG1P15918 RNU11-2P-201ENST00000516898 142 ntBASIC1.87□□□□□ -2.11
RAG1P15918 MIR4422-201ENST00000581938 83 ntBASIC1.87□□□□□ -2.11
RAG1P15918 MIR548Z-201ENST00000584743 97 ntBASIC1.87□□□□□ -2.11
RAG1P15918 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
RAG1P15918 Y_RNA.247-201ENST00000364500 92 ntBASIC1.86□□□□□ -2.11
RAG1P15918 SNORD45B-201ENST00000364617 72 ntBASIC1.86□□□□□ -2.11
RAG1P15918 RNU6-865P-201ENST00000364772 107 ntBASIC1.86□□□□□ -2.11
RAG1P15918 RNU6-949P-201ENST00000384040 107 ntBASIC1.86□□□□□ -2.11
RAG1P15918 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
RAG1P15918 AC096949.1-201ENST00000412047 152 ntBASIC1.86□□□□□ -2.11
RAG1P15918 RPS27P16-201ENST00000425758 201 ntBASIC1.86□□□□□ -2.11
RAG1P15918 Y_RNA.659-201ENST00000515994 113 ntBASIC1.86□□□□□ -2.11
RAG1P15918 RNU6-1006P-201ENST00000516998 103 ntBASIC1.86□□□□□ -2.11
RAG1P15918 MIR376B-201ENST00000614515 100 ntBASIC1.86□□□□□ -2.11
RAG1P15918 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-654P-201ENST00000364373 107 ntBASIC1.85□□□□□ -2.11
RAG1P15918 Y_RNA.342-201ENST00000365352 113 ntBASIC1.85□□□□□ -2.11
RAG1P15918 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RAG1P15918 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-447P-201ENST00000410293 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-1118P-201ENST00000410382 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-1076P-201ENST00000410397 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-613P-201ENST00000410412 108 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-355P-201ENST00000410427 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-791P-201ENST00000410467 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-705P-201ENST00000410601 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-1100P-201ENST00000410691 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-860P-201ENST00000410860 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-1217P-201ENST00000411276 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU6-785P-201ENST00000411324 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 RNU7-62P-201ENST00000458856 62 ntBASIC1.85□□□□□ -2.11
RAG1P15918 MIR4777-201ENST00000583710 86 ntBASIC1.85□□□□□ -2.11
RAG1P15918 AC096720.1-201ENST00000604441 183 ntBASIC1.85□□□□□ -2.11
RAG1P15918 U6.90-201ENST00000614007 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 MALAT1.1-201ENST00000618249 95 ntBASIC1.85□□□□□ -2.11
RAG1P15918 U6.70-201ENST00000620287 104 ntBASIC1.85□□□□□ -2.11
RAG1P15918 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RAG1P15918 Y_RNA.95-201ENST00000363079 95 ntBASIC1.84□□□□□ -2.11
RAG1P15918 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.84□□□□□ -2.11
RAG1P15918 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.84□□□□□ -2.11
RAG1P15918 RNU6-1165P-201ENST00000410119 107 ntBASIC1.84□□□□□ -2.11
RAG1P15918 RNU7-48P-201ENST00000458875 63 ntBASIC1.84□□□□□ -2.11
RAG1P15918 RNU7-61P-201ENST00000515897 61 ntBASIC1.84□□□□□ -2.11
RAG1P15918 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
RAG1P15918 AL645939.4-201ENST00000604495 135 ntBASIC1.84□□□□□ -2.11
RAG1P15918 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.84□□□□□ -2.11
RAG1P15918 MIR377-201ENST00000362145 69 ntBASIC1.83□□□□□ -2.12
RAG1P15918 MIR30D-201ENST00000362283 70 ntBASIC1.83□□□□□ -2.12
RAG1P15918 Y_RNA.191-201ENST00000363972 113 ntBASIC1.83□□□□□ -2.12
RAG1P15918 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
RAG1P15918 RNU6-644P-201ENST00000391155 98 ntBASIC1.83□□□□□ -2.12
RAG1P15918 RNA5SP95-201ENST00000410319 137 ntBASIC1.83□□□□□ -2.12
RAG1P15918 RPS29P28-201ENST00000446439 141 ntBASIC1.83□□□□□ -2.12
RAG1P15918 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.83□□□□□ -2.12
RAG1P15918 uc_338.6-201ENST00000613544 171 ntBASIC1.83□□□□□ -2.12
RAG1P15918 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.83□□□□□ -2.12
RAG1P15918 Y_RNA.98-201ENST00000363109 102 ntBASIC1.82□□□□□ -2.12
RAG1P15918 SNORA7.1-201ENST00000363750 139 ntBASIC1.82□□□□□ -2.12
RAG1P15918 SNORD38.1-201ENST00000363863 68 ntBASIC1.82□□□□□ -2.12
RAG1P15918 Y_RNA.220-201ENST00000364244 109 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms