Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-3Q9BYR6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-3Q9BYR6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP3-3Q9BYR6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 RNA5SP397-201ENST00000391323 118 ntBASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 AL645733.1-201ENST00000402250 217 ntBASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 SNORD110-201ENST00000408189 75 ntBASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 SCARNA16.5-201ENST00000517114 183 ntBASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR4658-201ENST00000584344 65 ntBASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRTAP3-3Q9BYR6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 RNA5SP507-201ENST00000363603 121 ntBASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR3074-201ENST00000384885 81 ntBASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 RNU6-1110P-201ENST00000516462 101 ntBASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 AC006064.5-201ENST00000541782 248 ntBASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR4727-201ENST00000622232 55 ntBASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP3-3Q9BYR6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 SUMO1P4-201ENST00000429430 302 ntBASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 RNU7-90P-201ENST00000459216 62 ntBASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR3200-201ENST00000580767 85 ntBASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 RN7SL690P-201ENST00000582087 240 ntBASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR6886-201ENST00000619864 61 ntBASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP3-3Q9BYR6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR302D-201ENST00000362275 68 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 SNORA70F-201ENST00000384142 135 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 SNORA80D-201ENST00000384488 135 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 MIRLET7B-201ENST00000385140 83 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 RN7SL293P-201ENST00000481765 281 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 MIR4310-201ENST00000582950 57 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP3-3Q9BYR6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP3-3Q9BYR6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP3-3Q9BYR6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP3-3Q9BYR6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR1178-201ENST00000408396 91 ntBASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 SNORA3C-201ENST00000408792 125 ntBASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR3937-201ENST00000580135 106 ntBASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 AL121772.2-201ENST00000614331 297 ntBASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR6826-201ENST00000617808 98 ntBASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP3-3Q9BYR6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 SNORA51.1-201ENST00000363243 140 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 RNA5SP175-201ENST00000364275 119 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 RNA5SP513-201ENST00000364648 118 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 RNA5SP87-201ENST00000384155 118 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 SNORA11F-201ENST00000408237 128 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 AL035423.1-201ENST00000420331 213 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 PPIAP20-201ENST00000449839 135 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 HMGN2P23-201ENST00000456759 269 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 U7.7-201ENST00000459276 60 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 SNORD63.1-201ENST00000516178 80 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 RN7SKP83-201ENST00000516512 178 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 AL512310.8-201ENST00000550183 120 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 AL360157.1-201ENST00000565962 87 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR3934-201ENST00000579806 107 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR7702-201ENST00000621931 59 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR4426-201ENST00000640330 63 ntBASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP3-3Q9BYR6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR298-201ENST00000401212 88 ntBASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 SPTLC1P2-201ENST00000407089 121 ntBASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 MIR548T-201ENST00000408369 74 ntBASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 KRTAP5-14P-201ENST00000502328 121 ntBASIC2.06□□□□□ -2.08
KRTAP3-3Q9BYR6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 299.8 ms