Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AP004217.1-201ENST00000480579 346 ntBASIC2.83□□□□□ -1.96
PHOX2BQ99453 AC090897.1-201ENST00000580909 226 ntBASIC2.83□□□□□ -1.96
PHOX2BQ99453 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PHOX2BQ99453 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PHOX2BQ99453 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PHOX2BQ99453 AC008163.1-202ENST00000636004 2889 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 SNORD41-201ENST00000386967 70 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 MT-TF-201ENST00000387314 71 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 AL138827.1-201ENST00000402666 306 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 RNU6-1053P-201ENST00000515930 101 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 RNU11-2P-201ENST00000516898 142 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 AC138749.4-201ENST00000563970 127 ntBASIC2.82□□□□□ -1.96
PHOX2BQ99453 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PHOX2BQ99453 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PHOX2BQ99453 SNORD4B-201ENST00000459083 72 ntBASIC2.81□□□□□ -1.96
PHOX2BQ99453 RNU6-850P-201ENST00000516934 103 ntBASIC2.81□□□□□ -1.96
PHOX2BQ99453 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 SNORD88.1-201ENST00000408684 91 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 RNU6-380P-201ENST00000410207 107 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 AC087499.7-201ENST00000441958 109 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 Y_RNA.648-201ENST00000459455 110 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 AC055731.1-201ENST00000474387 401 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 RNU6-65P-201ENST00000516332 98 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 RNU6-922P-201ENST00000516753 99 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 AC121758.2-201ENST00000553271 193 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 AC020891.4-201ENST00000605745 93 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 AC245884.12-201ENST00000615364 59 ntBASIC2.8□□□□□ -1.96
PHOX2BQ99453 RNU6-129P-201ENST00000391022 107 ntBASIC2.79□□□□□ -1.96
PHOX2BQ99453 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.79□□□□□ -1.96
PHOX2BQ99453 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PHOX2BQ99453 AL359851.1-201ENST00000569460 4997 ntBASIC2.79□□□□□ -1.96
PHOX2BQ99453 SNORD114-1-201ENST00000362705 72 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 Y_RNA.119-201ENST00000363301 96 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 RNU6-1165P-201ENST00000410119 107 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 RN7SL274P-201ENST00000492268 272 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 RNU6-250P-201ENST00000516958 103 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 AP000942.3-201ENST00000603702 160 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 U6.109-201ENST00000636749 87 ntBASIC2.78□□□□□ -1.96
PHOX2BQ99453 SNORA9.2-201ENST00000365361 133 ntBASIC2.77□□□□□ -1.97
PHOX2BQ99453 SNORA25.13-201ENST00000516395 103 ntBASIC2.77□□□□□ -1.97
PHOX2BQ99453 MIR4498-201ENST00000577599 66 ntBASIC2.77□□□□□ -1.97
PHOX2BQ99453 MIR3192-201ENST00000584920 77 ntBASIC2.77□□□□□ -1.97
PHOX2BQ99453 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
PHOX2BQ99453 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.76□□□□□ -1.97
PHOX2BQ99453 MIR377-201ENST00000362145 69 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 RNU6-1094P-201ENST00000362416 104 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 RNU6-53P-201ENST00000365367 106 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 SNORA72.6-201ENST00000384520 129 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 SNORD23.1-201ENST00000408212 104 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 AL133373.1-201ENST00000497098 94 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 AC145423.2-201ENST00000610631 239 ntBASIC2.76□□□□□ -1.97
PHOX2BQ99453 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.76□□□□□ -1.97
PHOX2BQ99453 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHOX2BQ99453 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.76□□□□□ -1.97
PHOX2BQ99453 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PHOX2BQ99453 RNU4-32P-201ENST00000363404 141 ntBASIC2.75□□□□□ -1.97
PHOX2BQ99453 RNU7-62P-201ENST00000458856 62 ntBASIC2.75□□□□□ -1.97
PHOX2BQ99453 snoU13.11-201ENST00000459219 104 ntBASIC2.75□□□□□ -1.97
PHOX2BQ99453 RPL30P7-201ENST00000479312 323 ntBASIC2.75□□□□□ -1.97
PHOX2BQ99453 AC015688.6-201ENST00000577737 104 ntBASIC2.75□□□□□ -1.97
PHOX2BQ99453 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PHOX2BQ99453 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.75□□□□□ -1.97
PHOX2BQ99453 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PHOX2BQ99453 MIR30D-201ENST00000362283 70 ntBASIC2.74□□□□□ -1.97
PHOX2BQ99453 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
PHOX2BQ99453 U7.4-201ENST00000614961 63 ntBASIC2.74□□□□□ -1.97
PHOX2BQ99453 MIR6740-201ENST00000618268 113 ntBASIC2.74□□□□□ -1.97
PHOX2BQ99453 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
PHOX2BQ99453 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PHOX2BQ99453 RNU6-1254P-201ENST00000391266 104 ntBASIC2.73□□□□□ -1.97
PHOX2BQ99453 MIR1302-7-201ENST00000408841 72 ntBASIC2.73□□□□□ -1.97
PHOX2BQ99453 RNU6-557P-201ENST00000516842 110 ntBASIC2.73□□□□□ -1.97
PHOX2BQ99453 MIR8074-201ENST00000615081 81 ntBASIC2.73□□□□□ -1.97
PHOX2BQ99453 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.73□□□□□ -1.97
PHOX2BQ99453 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PHOX2BQ99453 RNU6-624P-201ENST00000363411 107 ntBASIC2.72□□□□□ -1.97
PHOX2BQ99453 RNU4-83P-201ENST00000410863 133 ntBASIC2.72□□□□□ -1.97
PHOX2BQ99453 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
PHOX2BQ99453 Y_RNA.660-201ENST00000516002 120 ntBASIC2.72□□□□□ -1.97
PHOX2BQ99453 AL773524.1-201ENST00000614065 229 ntBASIC2.72□□□□□ -1.97
PHOX2BQ99453 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.71□□□□□ -1.97
PHOX2BQ99453 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
PHOX2BQ99453 RNU4-58P-201ENST00000363192 141 ntBASIC2.71□□□□□ -1.98
PHOX2BQ99453 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PHOX2BQ99453 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PHOX2BQ99453 RNU6-243P-201ENST00000391140 107 ntBASIC2.71□□□□□ -1.98
PHOX2BQ99453 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
PHOX2BQ99453 AC244636.1-201ENST00000421152 228 ntBASIC2.71□□□□□ -1.98
PHOX2BQ99453 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
PHOX2BQ99453 MIR4536-1-201ENST00000583537 88 ntBASIC2.71□□□□□ -1.98
PHOX2BQ99453 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PHOX2BQ99453 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PHOX2BQ99453 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PHOX2BQ99453 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PHOX2BQ99453 AC080100.1-201ENST00000624239 5356 ntBASIC2.7□□□□□ -1.98
PHOX2BQ99453 AL596028.1-201ENST00000326971 197 ntBASIC2.7□□□□□ -1.98
PHOX2BQ99453 SNORA25.9-201ENST00000365087 128 ntBASIC2.7□□□□□ -1.98
PHOX2BQ99453 MIR18B-201ENST00000454574 71 ntBASIC2.7□□□□□ -1.98
PHOX2BQ99453 SNORD33-201ENST00000362761 85 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms