Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCN10AQ9Y5Y9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SCN10AQ9Y5Y9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCN10AQ9Y5Y9 LINC01521-201ENST00000504184 1943 ntBASIC20.64■□□□□ 0.9
SCN10AQ9Y5Y9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 AL160237.2-201ENST00000556165 472 ntBASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 AL592071.1-201ENST00000611956 408 ntBASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.64■□□□□ 0.89
SCN10AQ9Y5Y9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 AC023511.2-201ENST00000618803 211 ntBASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 AC006333.2-201ENST00000607957 2099 ntBASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 AP002469.2-201ENST00000531724 424 ntBASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 MIR3180-4-201ENST00000582223 153 ntBASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 KRT89P-201ENST00000620027 1478 ntBASIC20.63■□□□□ 0.89
SCN10AQ9Y5Y9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 AC138894.3-201ENST00000603787 634 ntBASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 IRX1P1-201ENST00000438849 1838 ntBASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN10AQ9Y5Y9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 FEM1AP3-201ENST00000403722 1741 ntBASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 MIR564-202ENST00000385049 94 ntBASIC20.61■□□□□ 0.89
SCN10AQ9Y5Y9 IGHGP-201ENST00000390555 1178 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms