Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 PRORSD1P-201ENST00000295112 541 ntBASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 AC004951.3-201ENST00000418645 1148 ntBASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 AC142381.4-202ENST00000563973 229 ntBASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 KRT8P11-201ENST00000409686 1436 ntBASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 RCC2P6-201ENST00000526625 1557 ntBASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA11Q9Y5H2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 AC079598.2-202ENST00000546624 1451 ntBASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 AC093525.10-201ENST00000625130 1569 ntBASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 UBE2SP1-201ENST00000450587 669 ntBASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 AC091390.4-202ENST00000476426 537 ntBASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA11Q9Y5H2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGA11Q9Y5H2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGA11Q9Y5H2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA11Q9Y5H2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA11Q9Y5H2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHGA11Q9Y5H2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA11Q9Y5H2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms