Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.77■■□□□ 1.4
RTCBQ9Y3I0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTCBQ9Y3I0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.77■■□□□ 1.4
RTCBQ9Y3I0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.77■■□□□ 1.4
RTCBQ9Y3I0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 SAPCD2P3-201ENST00000455031 850 ntBASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 AL592071.1-201ENST00000611956 408 ntBASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTCBQ9Y3I0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 REXO1L6P-202ENST00000619970 1078 ntBASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 AC124864.1-201ENST00000623408 392 ntBASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 AC117500.6-201ENST00000624871 588 ntBASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RTCBQ9Y3I0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 IGHGP-201ENST00000390555 1178 ntBASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 GUSBP12-201ENST00000513727 720 ntBASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.74■■□□□ 1.39
RTCBQ9Y3I0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 TCF3P1-201ENST00000423021 1937 ntBASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 MIR564-202ENST00000385049 94 ntBASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 RN7SL606P-201ENST00000472779 293 ntBASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 AC139530.3-201ENST00000620344 690 ntBASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 AF228730.7-201ENST00000641842 219 ntBASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.73■■□□□ 1.39
RTCBQ9Y3I0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 PMS2P1-201ENST00000431037 1228 ntBASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
RTCBQ9Y3I0 AF238378.1-201ENST00000526806 358 ntBASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms