Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 IER3-202ENST00000376377 1350 ntBASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.54□□□□□ -0.08
NOTCH3Q9UM47 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 AL691432.3-201ENST00000621860 400 ntBASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 HBZP1-201ENST00000354915 429 ntBASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 TSPY21P-201ENST00000433481 731 ntBASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 TSPY23P-201ENST00000440136 739 ntBASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.53□□□□□ -0.08
NOTCH3Q9UM47 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 KRT8P45-201ENST00000414328 1447 ntBASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.52□□□□□ -0.08
NOTCH3Q9UM47 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms