Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 RNF165-205ENST00000588679 2904 ntBASIC21.69■■□□□ 1.06
PNMA3Q9UL41 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 AL732292.2-201ENST00000609649 430 ntBASIC21.69■■□□□ 1.06
PNMA3Q9UL41 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PNMA3Q9UL41 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 PVRIG2P-201ENST00000435460 978 ntBASIC21.68■■□□□ 1.06
PNMA3Q9UL41 KRT18P23-201ENST00000435622 1283 ntBASIC21.68■■□□□ 1.06
PNMA3Q9UL41 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 EMBP1-201ENST00000458200 901 ntBASIC21.68■■□□□ 1.06
PNMA3Q9UL41 TOB2P1-201ENST00000469761 992 ntBASIC21.68■■□□□ 1.06
PNMA3Q9UL41 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 RNF126P1-202ENST00000569893 925 ntBASIC21.68■■□□□ 1.06
PNMA3Q9UL41 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 AL109659.2-201ENST00000606809 1674 ntBASIC21.68■■□□□ 1.06
PNMA3Q9UL41 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PNMA3Q9UL41 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
PNMA3Q9UL41 TCF3P1-201ENST00000423021 1937 ntBASIC21.67■■□□□ 1.06
PNMA3Q9UL41 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 AIRN-201ENST00000601203 4374 ntBASIC21.66■■□□□ 1.06
PNMA3Q9UL41 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 AC090616.6-201ENST00000582640 721 ntBASIC21.66■■□□□ 1.06
PNMA3Q9UL41 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 AC010240.3-201ENST00000607688 395 ntBASIC21.66■■□□□ 1.06
PNMA3Q9UL41 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PNMA3Q9UL41 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 HOXB1-202ENST00000577092 1414 ntBASIC21.65■■□□□ 1.06
PNMA3Q9UL41 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.65■■□□□ 1.06
PNMA3Q9UL41 AC104390.1-201ENST00000555663 520 ntBASIC21.65■■□□□ 1.06
PNMA3Q9UL41 AL160237.2-201ENST00000556165 472 ntBASIC21.65■■□□□ 1.06
PNMA3Q9UL41 AL031008.1-201ENST00000619963 541 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms