Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.33■■□□□ 1.01
COL20A1Q9P218 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL20A1Q9P218 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.33■■□□□ 1.01
COL20A1Q9P218 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.33■■□□□ 1.01
COL20A1Q9P218 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL20A1Q9P218 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
COL20A1Q9P218 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL20A1Q9P218 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
COL20A1Q9P218 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL20A1Q9P218 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.33■■□□□ 1
COL20A1Q9P218 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.33■■□□□ 1
COL20A1Q9P218 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.32■■□□□ 1
COL20A1Q9P218 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.32■■□□□ 1
COL20A1Q9P218 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.32■■□□□ 1
COL20A1Q9P218 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL20A1Q9P218 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
COL20A1Q9P218 MIR564-202ENST00000385049 94 ntBASIC21.32■■□□□ 1
COL20A1Q9P218 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.32■■□□□ 1
COL20A1Q9P218 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.32■■□□□ 1
COL20A1Q9P218 AC068587.9-201ENST00000641814 219 ntBASIC21.32■■□□□ 1
COL20A1Q9P218 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.32■■□□□ 1
COL20A1Q9P218 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.32■■□□□ 1
COL20A1Q9P218 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
COL20A1Q9P218 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL20A1Q9P218 AL161938.1-201ENST00000569833 2180 ntBASIC21.31■■□□□ 1
COL20A1Q9P218 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
COL20A1Q9P218 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.31■■□□□ 1
COL20A1Q9P218 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 AC005332.7-201ENST00000614046 2005 ntBASIC21.31■■□□□ 1
COL20A1Q9P218 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL20A1Q9P218 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL20A1Q9P218 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.31■■□□□ 1
COL20A1Q9P218 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.31■■□□□ 1
COL20A1Q9P218 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.31■■□□□ 1
COL20A1Q9P218 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.31■■□□□ 1
COL20A1Q9P218 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL20A1Q9P218 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COL20A1Q9P218 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.3■■□□□ 1
COL20A1Q9P218 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 AC116562.4-201ENST00000641316 2276 ntBASIC21.3■■□□□ 1
COL20A1Q9P218 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
COL20A1Q9P218 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.3■■□□□ 1
COL20A1Q9P218 KRT18P23-201ENST00000435622 1283 ntBASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.3■■□□□ 1
COL20A1Q9P218 AC034232.1-201ENST00000506026 1064 ntBASIC21.3■■□□□ 1
COL20A1Q9P218 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.3■■□□□ 1
COL20A1Q9P218 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.3■■□□□ 1
COL20A1Q9P218 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.3■■□□□ 1
COL20A1Q9P218 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.3■■□□□ 1
COL20A1Q9P218 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.3■■□□□ 1
COL20A1Q9P218 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.3■■□□□ 1
COL20A1Q9P218 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.3■■□□□ 1
COL20A1Q9P218 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
COL20A1Q9P218 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL20A1Q9P218 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms