Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 MCCD1P1-208ENST00000445732 328 ntBASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 AC104076.2-201ENST00000448912 469 ntBASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 AC006011.2-201ENST00000621313 1158 ntBASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 AC036111.1-201ENST00000533973 1582 ntBASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPHK1Q9NYA1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
SPHK1Q9NYA1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SPHK1Q9NYA1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 AC008556.1-201ENST00000610908 2040 ntBASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPHK1Q9NYA1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 AC009947.2-201ENST00000444014 672 ntBASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPHK1Q9NYA1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.12■□□□□ 0.49
SPHK1Q9NYA1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms