Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.21■□□□□ 0.99
BCAS3Q9H6U6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.21■□□□□ 0.99
BCAS3Q9H6U6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.21■□□□□ 0.99
BCAS3Q9H6U6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.21■□□□□ 0.99
BCAS3Q9H6U6 AC083849.1-201ENST00000615227 514 ntBASIC21.21■□□□□ 0.99
BCAS3Q9H6U6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 AC024243.1-201ENST00000609234 778 ntBASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BCAS3Q9H6U6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 AC092597.1-201ENST00000487352 616 ntBASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 AC005332.1-201ENST00000577698 1310 ntBASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 FP475955.4-201ENST00000623131 1990 ntBASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BCAS3Q9H6U6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 AC008556.1-201ENST00000610908 2040 ntBASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 STARP1-201ENST00000397973 869 ntBASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 AC091076.1-201ENST00000610741 619 ntBASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 AL121956.5-201ENST00000625261 221 ntBASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 FEM1AP3-201ENST00000403722 1741 ntBASIC21.18■□□□□ 0.98
BCAS3Q9H6U6 AL512353.2-201ENST00000448759 1962 ntBASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 AL161938.1-201ENST00000569833 2180 ntBASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 AP000550.4-202ENST00000639755 178 ntBASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 AC141586.3-201ENST00000562166 1838 ntBASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.17■□□□□ 0.98
BCAS3Q9H6U6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms