Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 AP001094.1-201ENST00000579805 193 ntBASIC20.89■□□□□ 0.93
RNF39Q9H2S5 AL023803.3-201ENST00000615559 522 ntBASIC20.89■□□□□ 0.93
RNF39Q9H2S5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 AC104417.2-201ENST00000562989 1793 ntBASIC20.89■□□□□ 0.93
RNF39Q9H2S5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF39Q9H2S5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AL009172.1-201ENST00000436365 1098 ntBASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AC007663.1-201ENST00000438948 1240 ntBASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AC128688.1-201ENST00000487626 519 ntBASIC20.88■□□□□ 0.93
RNF39Q9H2S5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF39Q9H2S5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AL512661.1-201ENST00000434586 1253 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 MTCO1P47-201ENST00000523889 1271 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 CKBP1-201ENST00000565489 1086 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC006011.2-201ENST00000621313 1158 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC116562.4-202ENST00000641738 218 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 KRT8P11-201ENST00000409686 1436 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF39Q9H2S5 AC092338.2-201ENST00000568827 1415 ntBASIC20.87■□□□□ 0.93
RNF39Q9H2S5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 AC016598.1-201ENST00000340585 560 ntTSL 4 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 MTND4LP11-201ENST00000422184 280 ntBASIC20.86■□□□□ 0.93
RNF39Q9H2S5 SLC25A1P2-201ENST00000430693 912 ntBASIC20.86■□□□□ 0.93
RNF39Q9H2S5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF39Q9H2S5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms