Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SPENQ96T58 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SPENQ96T58 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17■□□□□ 0.31
SPENQ96T58 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17■□□□□ 0.31
SPENQ96T58 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SPENQ96T58 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17■□□□□ 0.31
SPENQ96T58 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SPENQ96T58 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 AL160237.2-201ENST00000556165 472 ntBASIC17■□□□□ 0.31
SPENQ96T58 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17■□□□□ 0.31
SPENQ96T58 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17■□□□□ 0.31
SPENQ96T58 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 AC079834.2-201ENST00000609776 1949 ntBASIC17■□□□□ 0.31
SPENQ96T58 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17■□□□□ 0.31
SPENQ96T58 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SPENQ96T58 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SPENQ96T58 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 MIR7706-201ENST00000613747 67 ntBASIC16.99■□□□□ 0.31
SPENQ96T58 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.99■□□□□ 0.31
SPENQ96T58 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.99■□□□□ 0.31
SPENQ96T58 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.99■□□□□ 0.31
SPENQ96T58 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.99■□□□□ 0.31
SPENQ96T58 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SPENQ96T58 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 AC009237.14-201ENST00000609975 1594 ntBASIC16.98■□□□□ 0.31
SPENQ96T58 AC007952.6-201ENST00000573168 2673 ntBASIC16.98■□□□□ 0.31
SPENQ96T58 AC003957.1-201ENST00000625108 2673 ntBASIC16.98■□□□□ 0.31
SPENQ96T58 KRT18P13-201ENST00000400056 1290 ntBASIC16.98■□□□□ 0.31
SPENQ96T58 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.98■□□□□ 0.31
SPENQ96T58 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 AF238378.1-201ENST00000526806 358 ntBASIC16.98■□□□□ 0.31
SPENQ96T58 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.98■□□□□ 0.31
SPENQ96T58 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.98■□□□□ 0.31
SPENQ96T58 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SPENQ96T58 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.97■□□□□ 0.31
SPENQ96T58 ZNF815P-204ENST00000434898 1737 ntBASIC16.97■□□□□ 0.31
SPENQ96T58 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.97■□□□□ 0.31
SPENQ96T58 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.97■□□□□ 0.31
SPENQ96T58 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SPENQ96T58 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SPENQ96T58 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPENQ96T58 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms