Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP1Q96SZ6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 AL023973.1-201ENST00000624619 620 ntBASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP1Q96SZ6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 AL445228.2-201ENST00000605589 952 ntBASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDK5RAP1Q96SZ6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 KRT18P35-201ENST00000510488 1269 ntBASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 AL441883.1-201ENST00000566170 1045 ntBASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.54■□□□□ 0.72
CDK5RAP1Q96SZ6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CDK5RAP1Q96SZ6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms