Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH3Q96II8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.39■□□□□ 0.85
LRCH3Q96II8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH3Q96II8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH3Q96II8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH3Q96II8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRCH3Q96II8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 KRT18P28-201ENST00000453838 1332 ntBASIC20.38■□□□□ 0.85
LRCH3Q96II8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.38■□□□□ 0.85
LRCH3Q96II8 FAM215A-202ENST00000632077 792 ntBASIC20.38■□□□□ 0.85
LRCH3Q96II8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LRCH3Q96II8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRCH3Q96II8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 AC104109.2-201ENST00000602919 1418 ntBASIC20.37■□□□□ 0.85
LRCH3Q96II8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 MED15P5-201ENST00000423150 992 ntBASIC20.37■□□□□ 0.85
LRCH3Q96II8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 SEC1P-202ENST00000473944 940 ntBASIC20.37■□□□□ 0.85
LRCH3Q96II8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.37■□□□□ 0.85
LRCH3Q96II8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRCH3Q96II8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 METTL21AP1-201ENST00000438852 635 ntBASIC20.36■□□□□ 0.85
LRCH3Q96II8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 RFPL4AP1-201ENST00000530883 850 ntBASIC20.36■□□□□ 0.85
LRCH3Q96II8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 AC005332.3-201ENST00000589904 676 ntBASIC20.36■□□□□ 0.85
LRCH3Q96II8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRCH3Q96II8 LINC01006-201ENST00000333319 2292 ntBASIC20.36■□□□□ 0.85
LRCH3Q96II8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
LRCH3Q96II8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.35■□□□□ 0.85
LRCH3Q96II8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.35■□□□□ 0.85
LRCH3Q96II8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRCH3Q96II8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.35■□□□□ 0.85
LRCH3Q96II8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms