Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AL161938.1-201ENST00000569833 2180 ntBASIC16.7■□□□□ 0.26
APH1AQ96BI3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 AL137013.1-201ENST00000432946 1228 ntBASIC16.7■□□□□ 0.26
APH1AQ96BI3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
APH1AQ96BI3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
APH1AQ96BI3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
APH1AQ96BI3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.69■□□□□ 0.26
APH1AQ96BI3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 AC008622.2-201ENST00000617006 1229 ntBASIC16.68■□□□□ 0.26
APH1AQ96BI3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
APH1AQ96BI3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.67■□□□□ 0.26
APH1AQ96BI3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
APH1AQ96BI3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
APH1AQ96BI3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.67■□□□□ 0.26
APH1AQ96BI3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 TERF1P1-201ENST00000311003 1181 ntBASIC16.67■□□□□ 0.26
APH1AQ96BI3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.67■□□□□ 0.26
APH1AQ96BI3 MCCD1P1-208ENST00000445732 328 ntBASIC16.67■□□□□ 0.26
APH1AQ96BI3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
APH1AQ96BI3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms