Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VPS33AQ96AX1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS33AQ96AX1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS33AQ96AX1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.14■□□□□ 0.49
VPS33AQ96AX1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VPS33AQ96AX1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.14■□□□□ 0.49
VPS33AQ96AX1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 SOX15-203ENST00000570788 1093 ntBASIC18.13■□□□□ 0.49
VPS33AQ96AX1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.13■□□□□ 0.49
VPS33AQ96AX1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 AC126763.1-201ENST00000552015 2118 ntBASIC18.13■□□□□ 0.49
VPS33AQ96AX1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS33AQ96AX1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 NCF1B-203ENST00000435988 1254 ntBASIC18.12■□□□□ 0.49
VPS33AQ96AX1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 HTR7P1-202ENST00000624664 4411 ntBASIC18.12■□□□□ 0.49
VPS33AQ96AX1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS33AQ96AX1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.11■□□□□ 0.49
VPS33AQ96AX1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 AC083880.1-201ENST00000608266 535 ntBASIC18.11■□□□□ 0.49
VPS33AQ96AX1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 AC068880.1-201ENST00000507289 2297 ntBASIC18.11■□□□□ 0.49
VPS33AQ96AX1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS33AQ96AX1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VPS33AQ96AX1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms