Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 SPDYE15P-201ENST00000424157 909 ntBASIC21.28■■□□□ 1
VTI1AQ96AJ9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 AC092119.3-201ENST00000612618 583 ntBASIC21.28■■□□□ 1
VTI1AQ96AJ9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.28■■□□□ 1
VTI1AQ96AJ9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.28■■□□□ 1
VTI1AQ96AJ9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.27■■□□□ 1
VTI1AQ96AJ9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.27■■□□□ 1
VTI1AQ96AJ9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.27■■□□□ 1
VTI1AQ96AJ9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VTI1AQ96AJ9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VTI1AQ96AJ9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
VTI1AQ96AJ9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 AC138932.1-201ENST00000534164 6830 ntBASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 MIR3652-201ENST00000579335 131 ntBASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VTI1AQ96AJ9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 PRELID1P1-202ENST00000567272 903 ntBASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 AC092329.2-201ENST00000598402 547 ntBASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 AL158211.5-201ENST00000623583 2518 ntBASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VTI1AQ96AJ9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VTI1AQ96AJ9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VTI1AQ96AJ9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
VTI1AQ96AJ9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms