Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 AC104109.2-201ENST00000602919 1418 ntBASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 SDHAP1-207ENST00000440850 2000 ntBASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 AC116407.3-201ENST00000623905 1129 ntBASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ALMS1Q8TCU4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 AC124864.1-201ENST00000623408 392 ntBASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ZNF815P-204ENST00000434898 1737 ntBASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.7□□□□□ -0.38
ALMS1Q8TCU4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ALMS1Q8TCU4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 NUS1P2-201ENST00000417358 873 ntBASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 AC114341.1-201ENST00000618070 349 ntBASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ALMS1Q8TCU4 AC026310.3-201ENST00000625186 2373 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms