Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF248Q8NDW4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF248Q8NDW4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.02■□□□□ 0.47
ZNF248Q8NDW4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF248Q8NDW4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 AC011498.5-201ENST00000592027 486 ntBASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 AC023511.2-201ENST00000618803 211 ntBASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF248Q8NDW4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 LINC01465-201ENST00000408887 1940 ntBASIC18■□□□□ 0.47
ZNF248Q8NDW4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 NUS1P1-201ENST00000446295 882 ntBASIC18■□□□□ 0.47
ZNF248Q8NDW4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 AC006538.3-201ENST00000612495 578 ntBASIC18■□□□□ 0.47
ZNF248Q8NDW4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF248Q8NDW4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
ZNF248Q8NDW4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 RASA4DP-201ENST00000460726 1199 ntBASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF248Q8NDW4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms