Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS13CQ709C8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.71■□□□□ 0.1
VPS13CQ709C8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.71■□□□□ 0.1
VPS13CQ709C8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
VPS13CQ709C8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.71■□□□□ 0.1
VPS13CQ709C8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VPS13CQ709C8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VPS13CQ709C8 AC022898.2-201ENST00000616822 1312 ntBASIC15.69■□□□□ 0.1
VPS13CQ709C8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 KRT18P67-201ENST00000432816 1264 ntBASIC15.69■□□□□ 0.1
VPS13CQ709C8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 AL355385.1-201ENST00000606123 409 ntBASIC15.69■□□□□ 0.1
VPS13CQ709C8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VPS13CQ709C8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 AC005332.3-201ENST00000589904 676 ntBASIC15.69■□□□□ 0.1
VPS13CQ709C8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VPS13CQ709C8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
VPS13CQ709C8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms