Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.04■□□□□ 0.32
RPS4XP62701 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 TSPY15P-201ENST00000457163 923 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4XP62701 PRSS44-201ENST00000515154 1146 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4XP62701 AP003071.4-201ENST00000562276 1284 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.04■□□□□ 0.32
RPS4XP62701 CD177P1-201ENST00000606252 935 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 AC010331.1-201ENST00000611423 582 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.04■□□□□ 0.32
RPS4XP62701 AC131212.4-201ENST00000623606 975 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.04■□□□□ 0.32
RPS4XP62701 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4XP62701 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4XP62701 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.04■□□□□ 0.32
RPS4XP62701 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.04■□□□□ 0.32
RPS4XP62701 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPS4XP62701 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPS4XP62701 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.04■□□□□ 0.32
RPS4XP62701 HEIH-201ENST00000623091 1652 ntBASIC17.04■□□□□ 0.32
RPS4XP62701 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RPS4XP62701 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.03■□□□□ 0.32
RPS4XP62701 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 AC005082.1-201ENST00000413042 2259 ntBASIC17.03■□□□□ 0.32
RPS4XP62701 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 KSR1P1-201ENST00000446298 240 ntBASIC17.03■□□□□ 0.32
RPS4XP62701 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RPS4XP62701 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.03■□□□□ 0.32
RPS4XP62701 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.03■□□□□ 0.32
RPS4XP62701 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RPS4XP62701 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RPS4XP62701 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RPS4XP62701 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.03■□□□□ 0.32
RPS4XP62701 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPS4XP62701 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 RCC2P6-201ENST00000526625 1557 ntBASIC17.02■□□□□ 0.32
RPS4XP62701 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RPS4XP62701 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RPS4XP62701 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RPS4XP62701 AP002982.1-201ENST00000492365 877 ntBASIC17.02■□□□□ 0.32
RPS4XP62701 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.02■□□□□ 0.32
RPS4XP62701 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.02■□□□□ 0.32
RPS4XP62701 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RPS4XP62701 AC073195.1-201ENST00000607241 877 ntBASIC17.02■□□□□ 0.32
RPS4XP62701 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RPS4XP62701 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPS4XP62701 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RPS4XP62701 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPS4XP62701 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPS4XP62701 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPS4XP62701 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPS4XP62701 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.02■□□□□ 0.31
RPS4XP62701 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPS4XP62701 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPS4XP62701 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPS4XP62701 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RPS4XP62701 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms