Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.99■□□□□ 0.63
AP1S1P61966 WWOX-216ENST00000569818 525 ntBASIC18.99■□□□□ 0.63
AP1S1P61966 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.99■□□□□ 0.63
AP1S1P61966 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
AP1S1P61966 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
AP1S1P61966 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP1S1P61966 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.98■□□□□ 0.63
AP1S1P61966 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
AP1S1P61966 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 HEIH-201ENST00000623091 1652 ntBASIC18.98■□□□□ 0.63
AP1S1P61966 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.98■□□□□ 0.63
AP1S1P61966 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
AP1S1P61966 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.98■□□□□ 0.63
AP1S1P61966 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.98■□□□□ 0.63
AP1S1P61966 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.98■□□□□ 0.63
AP1S1P61966 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 ATP5G1P1-201ENST00000448724 379 ntBASIC18.98■□□□□ 0.63
AP1S1P61966 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.98■□□□□ 0.63
AP1S1P61966 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 KRT8P45-201ENST00000414328 1447 ntBASIC18.98■□□□□ 0.63
AP1S1P61966 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
AP1S1P61966 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
AP1S1P61966 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
AP1S1P61966 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP1S1P61966 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
AP1S1P61966 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
AP1S1P61966 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 AC010203.1-204ENST00000548782 407 ntBASIC18.97■□□□□ 0.63
AP1S1P61966 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.97■□□□□ 0.63
AP1S1P61966 CR769767.2-201ENST00000622735 460 ntBASIC18.97■□□□□ 0.63
AP1S1P61966 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
AP1S1P61966 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
AP1S1P61966 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP1S1P61966 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.96■□□□□ 0.63
AP1S1P61966 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
AP1S1P61966 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 AC005521.1-201ENST00000393351 872 ntBASIC18.96■□□□□ 0.63
AP1S1P61966 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
AP1S1P61966 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.96■□□□□ 0.63
AP1S1P61966 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.96■□□□□ 0.63
AP1S1P61966 AC073508.3-201ENST00000619697 1419 ntBASIC18.96■□□□□ 0.63
AP1S1P61966 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.96■□□□□ 0.63
AP1S1P61966 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.96■□□□□ 0.63
AP1S1P61966 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
AP1S1P61966 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP1S1P61966 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.96■□□□□ 0.63
AP1S1P61966 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
AP1S1P61966 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.95■□□□□ 0.62
AP1S1P61966 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 AC036111.1-201ENST00000533973 1582 ntBASIC18.95■□□□□ 0.62
AP1S1P61966 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP1S1P61966 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.95■□□□□ 0.62
AP1S1P61966 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms