Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDH11P55287 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.29■□□□□ 0.36
CDH11P55287 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDH11P55287 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH11P55287 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH11P55287 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDH11P55287 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH11P55287 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH11P55287 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH11P55287 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH11P55287 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH11P55287 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH11P55287 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH11P55287 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH11P55287 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.28■□□□□ 0.36
CDH11P55287 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH11P55287 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.28■□□□□ 0.36
CDH11P55287 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH11P55287 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH11P55287 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH11P55287 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH11P55287 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH11P55287 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH11P55287 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH11P55287 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH11P55287 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CDH11P55287 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH11P55287 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CDH11P55287 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH11P55287 AC133681.1-201ENST00000465482 601 ntBASIC17.27■□□□□ 0.36
CDH11P55287 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH11P55287 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH11P55287 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.27■□□□□ 0.36
CDH11P55287 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH11P55287 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH11P55287 AC110285.5-201ENST00000611501 352 ntBASIC17.27■□□□□ 0.36
CDH11P55287 AC005332.8-201ENST00000622750 2735 ntBASIC17.27■□□□□ 0.36
CDH11P55287 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH11P55287 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH11P55287 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH11P55287 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH11P55287 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CDH11P55287 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.26■□□□□ 0.35
CDH11P55287 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 Z99916.2-201ENST00000604037 246 ntBASIC17.26■□□□□ 0.35
CDH11P55287 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH11P55287 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH11P55287 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH11P55287 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH11P55287 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH11P55287 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CDH11P55287 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH11P55287 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH11P55287 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH11P55287 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH11P55287 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH11P55287 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CDH11P55287 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH11P55287 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH11P55287 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms