Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
EPHA4P54764 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EPHA4P54764 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EPHA4P54764 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.15■□□□□ 0.5
EPHA4P54764 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.15■□□□□ 0.5
EPHA4P54764 AC141586.3-201ENST00000562166 1838 ntBASIC18.15■□□□□ 0.5
EPHA4P54764 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 AL136038.3-201ENST00000561909 1096 ntBASIC18.15■□□□□ 0.5
EPHA4P54764 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.15■□□□□ 0.5
EPHA4P54764 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.15■□□□□ 0.5
EPHA4P54764 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
EPHA4P54764 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 AL512353.2-201ENST00000448759 1962 ntBASIC18.15■□□□□ 0.5
EPHA4P54764 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EPHA4P54764 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.14■□□□□ 0.5
EPHA4P54764 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.14■□□□□ 0.5
EPHA4P54764 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.14■□□□□ 0.49
EPHA4P54764 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 PCED1CP-201ENST00000419887 785 ntBASIC18.14■□□□□ 0.49
EPHA4P54764 SPDYE15P-201ENST00000424157 909 ntBASIC18.14■□□□□ 0.49
EPHA4P54764 UPK3BP1-201ENST00000428678 509 ntBASIC18.14■□□□□ 0.49
EPHA4P54764 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EPHA4P54764 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.14■□□□□ 0.49
EPHA4P54764 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EPHA4P54764 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EPHA4P54764 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.14■□□□□ 0.49
EPHA4P54764 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 IER3-202ENST00000376377 1350 ntBASIC18.14■□□□□ 0.49
EPHA4P54764 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA4P54764 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EPHA4P54764 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
EPHA4P54764 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA4P54764 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.13■□□□□ 0.49
EPHA4P54764 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.13■□□□□ 0.49
EPHA4P54764 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.13■□□□□ 0.49
EPHA4P54764 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.13■□□□□ 0.49
EPHA4P54764 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA4P54764 ZNF444P1-201ENST00000559497 298 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.13■□□□□ 0.49
EPHA4P54764 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 HYMAI.1-201ENST00000620949 238 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA4P54764 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.13■□□□□ 0.49
EPHA4P54764 IRX1P1-201ENST00000438849 1838 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA4P54764 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.13■□□□□ 0.49
EPHA4P54764 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 FP475955.4-201ENST00000623131 1990 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 KRT8P7-201ENST00000533003 1432 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA4P54764 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA4P54764 RCC2P3-201ENST00000418112 1537 ntBASIC18.13■□□□□ 0.49
EPHA4P54764 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
EPHA4P54764 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA4P54764 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 AL020996.1-203ENST00000536896 2307 ntBASIC18.12■□□□□ 0.49
EPHA4P54764 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.12■□□□□ 0.49
EPHA4P54764 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA4P54764 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EPHA4P54764 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
EPHA4P54764 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHA4P54764 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA4P54764 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms