Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.48■□□□□ 0.55
CLCNKAP51800 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCNKAP51800 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.48■□□□□ 0.55
CLCNKAP51800 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLCNKAP51800 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLCNKAP51800 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLCNKAP51800 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCNKAP51800 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
CLCNKAP51800 AP000523.1-201ENST00000398242 1049 ntBASIC18.47■□□□□ 0.55
CLCNKAP51800 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 AC117947.1-201ENST00000427448 529 ntBASIC18.47■□□□□ 0.55
CLCNKAP51800 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCNKAP51800 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CLCNKAP51800 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCNKAP51800 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.47■□□□□ 0.55
CLCNKAP51800 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.47■□□□□ 0.55
CLCNKAP51800 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLCNKAP51800 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.47■□□□□ 0.55
CLCNKAP51800 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLCNKAP51800 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.46■□□□□ 0.55
CLCNKAP51800 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCNKAP51800 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCNKAP51800 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 AL023284.2-201ENST00000405850 579 ntBASIC18.46■□□□□ 0.55
CLCNKAP51800 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.46■□□□□ 0.55
CLCNKAP51800 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCNKAP51800 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
CLCNKAP51800 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.46■□□□□ 0.55
CLCNKAP51800 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCNKAP51800 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCNKAP51800 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCNKAP51800 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCNKAP51800 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCNKAP51800 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLCNKAP51800 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLCNKAP51800 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLCNKAP51800 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 AL161938.1-201ENST00000569833 2180 ntBASIC18.45■□□□□ 0.54
CLCNKAP51800 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 RNF152P1-201ENST00000397754 604 ntBASIC18.45■□□□□ 0.54
CLCNKAP51800 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 AK4P3-201ENST00000418260 669 ntBASIC18.45■□□□□ 0.54
CLCNKAP51800 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CLCNKAP51800 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCNKAP51800 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCNKAP51800 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCNKAP51800 CR769767.2-201ENST00000622735 460 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms