Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FNTAP49354 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.6■□□□□ 0.73
FNTAP49354 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.6■□□□□ 0.73
FNTAP49354 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.6■□□□□ 0.73
FNTAP49354 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.6■□□□□ 0.73
FNTAP49354 HLA-A-209ENST00000638375 975 ntBASIC19.6■□□□□ 0.73
FNTAP49354 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.6■□□□□ 0.73
FNTAP49354 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 AL162741.1-201ENST00000565563 1558 ntBASIC19.6■□□□□ 0.73
FNTAP49354 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.6■□□□□ 0.73
FNTAP49354 PRORSD1P-202ENST00000563365 2154 ntBASIC19.6■□□□□ 0.73
FNTAP49354 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
FNTAP49354 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.6■□□□□ 0.73
FNTAP49354 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.6■□□□□ 0.73
FNTAP49354 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FNTAP49354 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
FNTAP49354 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.59■□□□□ 0.73
FNTAP49354 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.59■□□□□ 0.73
FNTAP49354 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.59■□□□□ 0.73
FNTAP49354 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.59■□□□□ 0.73
FNTAP49354 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.59■□□□□ 0.73
FNTAP49354 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
FNTAP49354 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.59■□□□□ 0.73
FNTAP49354 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.59■□□□□ 0.73
FNTAP49354 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
FNTAP49354 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
FNTAP49354 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
FNTAP49354 AC126763.1-201ENST00000552015 2118 ntBASIC19.58■□□□□ 0.73
FNTAP49354 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNTAP49354 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNTAP49354 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
FNTAP49354 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
FNTAP49354 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
FNTAP49354 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNTAP49354 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
FNTAP49354 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
FNTAP49354 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
FNTAP49354 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.58■□□□□ 0.72
FNTAP49354 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FNTAP49354 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.58■□□□□ 0.72
FNTAP49354 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 C1QL1P1-201ENST00000568105 661 ntBASIC19.58■□□□□ 0.72
FNTAP49354 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.58■□□□□ 0.72
FNTAP49354 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.58■□□□□ 0.72
FNTAP49354 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.58■□□□□ 0.72
FNTAP49354 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
FNTAP49354 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
FNTAP49354 HEIH-201ENST00000623091 1652 ntBASIC19.58■□□□□ 0.72
FNTAP49354 AC067852.2-201ENST00000590513 2313 ntBASIC19.58■□□□□ 0.72
FNTAP49354 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNTAP49354 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
FNTAP49354 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNTAP49354 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNTAP49354 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
FNTAP49354 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.58■□□□□ 0.72
FNTAP49354 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
FNTAP49354 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNTAP49354 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
FNTAP49354 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
FNTAP49354 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms