Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.76■□□□□ 0.59
CTSKP43235 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CTSKP43235 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CTSKP43235 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CTSKP43235 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
CTSKP43235 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.76■□□□□ 0.59
CTSKP43235 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.76■□□□□ 0.59
CTSKP43235 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CTSKP43235 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.75■□□□□ 0.59
CTSKP43235 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.75■□□□□ 0.59
CTSKP43235 LINC01311-201ENST00000565162 1445 ntBASIC18.75■□□□□ 0.59
CTSKP43235 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
CTSKP43235 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 AL450487.1-201ENST00000426799 995 ntBASIC18.75■□□□□ 0.59
CTSKP43235 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CTSKP43235 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.75■□□□□ 0.59
CTSKP43235 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.75■□□□□ 0.59
CTSKP43235 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.75■□□□□ 0.59
CTSKP43235 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CTSKP43235 BX323043.1-201ENST00000641006 1765 ntBASIC18.75■□□□□ 0.59
CTSKP43235 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTSKP43235 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTSKP43235 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.74■□□□□ 0.59
CTSKP43235 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 SPDYE15P-201ENST00000424157 909 ntBASIC18.74■□□□□ 0.59
CTSKP43235 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.74■□□□□ 0.59
CTSKP43235 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.74■□□□□ 0.59
CTSKP43235 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.74■□□□□ 0.59
CTSKP43235 CLEC4GP1-201ENST00000596555 870 ntBASIC18.74■□□□□ 0.59
CTSKP43235 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.74■□□□□ 0.59
CTSKP43235 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.74■□□□□ 0.59
CTSKP43235 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.74■□□□□ 0.59
CTSKP43235 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.74■□□□□ 0.59
CTSKP43235 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTSKP43235 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.73■□□□□ 0.59
CTSKP43235 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTSKP43235 AIRN-201ENST00000601203 4374 ntBASIC18.73■□□□□ 0.59
CTSKP43235 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.73■□□□□ 0.59
CTSKP43235 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.73■□□□□ 0.59
CTSKP43235 CR769767.2-201ENST00000622735 460 ntBASIC18.73■□□□□ 0.59
CTSKP43235 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.73■□□□□ 0.59
CTSKP43235 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.73■□□□□ 0.59
CTSKP43235 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTSKP43235 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTSKP43235 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.73■□□□□ 0.59
CTSKP43235 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTSKP43235 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTSKP43235 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTSKP43235 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTSKP43235 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms