Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA3P32297 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA3P32297 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHRNA3P32297 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHRNA3P32297 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA3P32297 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA3P32297 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHRNA3P32297 KRT17P2-201ENST00000300992 1314 ntBASIC19.89■□□□□ 0.77
CHRNA3P32297 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA3P32297 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA3P32297 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.89■□□□□ 0.77
CHRNA3P32297 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA3P32297 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.89■□□□□ 0.77
CHRNA3P32297 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA3P32297 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA3P32297 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.89■□□□□ 0.77
CHRNA3P32297 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CHRNA3P32297 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHRNA3P32297 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CHRNA3P32297 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA3P32297 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA3P32297 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.88■□□□□ 0.77
CHRNA3P32297 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.88■□□□□ 0.77
CHRNA3P32297 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHRNA3P32297 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 AP002982.1-201ENST00000492365 877 ntBASIC19.88■□□□□ 0.77
CHRNA3P32297 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.88■□□□□ 0.77
CHRNA3P32297 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.88■□□□□ 0.77
CHRNA3P32297 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA3P32297 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA3P32297 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA3P32297 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA3P32297 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.87■□□□□ 0.77
CHRNA3P32297 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 MIR4785-201ENST00000585005 73 ntBASIC19.87■□□□□ 0.77
CHRNA3P32297 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 AC073195.1-201ENST00000607241 877 ntBASIC19.87■□□□□ 0.77
CHRNA3P32297 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA3P32297 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHRNA3P32297 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA3P32297 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA3P32297 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA3P32297 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA3P32297 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHRNA3P32297 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHRNA3P32297 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.86■□□□□ 0.77
CHRNA3P32297 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA3P32297 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 CD177P1-201ENST00000606252 935 ntBASIC19.86■□□□□ 0.77
CHRNA3P32297 AL353708.3-201ENST00000610272 989 ntBASIC19.86■□□□□ 0.77
CHRNA3P32297 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.86■□□□□ 0.77
CHRNA3P32297 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms