Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.27■■□□□ 1
CTGFP29279 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.27■■□□□ 1
CTGFP29279 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.27■■□□□ 1
CTGFP29279 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.27■■□□□ 1
CTGFP29279 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.27■■□□□ 1
CTGFP29279 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
CTGFP29279 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.27■■□□□ 1
CTGFP29279 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CTGFP29279 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.27■■□□□ 1
CTGFP29279 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.27■■□□□ 1
CTGFP29279 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTGFP29279 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.27■□□□□ 0.99
CTGFP29279 AL512353.2-201ENST00000448759 1962 ntBASIC21.27■□□□□ 0.99
CTGFP29279 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.26■□□□□ 0.99
CTGFP29279 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CTGFP29279 MIR7706-201ENST00000613747 67 ntBASIC21.26■□□□□ 0.99
CTGFP29279 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTGFP29279 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CTGFP29279 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.25■□□□□ 0.99
CTGFP29279 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.25■□□□□ 0.99
CTGFP29279 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CTGFP29279 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.25■□□□□ 0.99
CTGFP29279 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.25■□□□□ 0.99
CTGFP29279 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.25■□□□□ 0.99
CTGFP29279 GUSBP12-201ENST00000513727 720 ntBASIC21.25■□□□□ 0.99
CTGFP29279 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.25■□□□□ 0.99
CTGFP29279 BNIP3P18-201ENST00000593976 575 ntBASIC21.25■□□□□ 0.99
CTGFP29279 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
CTGFP29279 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.25■□□□□ 0.99
CTGFP29279 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTGFP29279 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CTGFP29279 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 AC099778.1-201ENST00000568593 1911 ntBASIC21.24■□□□□ 0.99
CTGFP29279 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.24■□□□□ 0.99
CTGFP29279 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 RNPS1P1-201ENST00000507437 918 ntBASIC21.24■□□□□ 0.99
CTGFP29279 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.24■□□□□ 0.99
CTGFP29279 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.24■□□□□ 0.99
CTGFP29279 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.24■□□□□ 0.99
CTGFP29279 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.24■□□□□ 0.99
CTGFP29279 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTGFP29279 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CTGFP29279 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.23■□□□□ 0.99
CTGFP29279 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 AC018712.1-201ENST00000455767 687 ntBASIC21.23■□□□□ 0.99
CTGFP29279 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CTGFP29279 AC073648.2-201ENST00000510116 352 ntBASIC21.23■□□□□ 0.99
CTGFP29279 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.23■□□□□ 0.99
CTGFP29279 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CTGFP29279 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.23■□□□□ 0.99
CTGFP29279 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CTGFP29279 PMS2P7-201ENST00000506558 1336 ntBASIC21.23■□□□□ 0.99
CTGFP29279 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 TREX1-205ENST00000625293 1783 ntBASIC21.23■□□□□ 0.99
CTGFP29279 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTGFP29279 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTGFP29279 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CTGFP29279 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.22■□□□□ 0.99
CTGFP29279 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTGFP29279 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTGFP29279 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTGFP29279 MIR564-202ENST00000385049 94 ntBASIC21.22■□□□□ 0.99
CTGFP29279 MIR940-201ENST00000401276 94 ntBASIC21.22■□□□□ 0.99
CTGFP29279 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.22■□□□□ 0.99
CTGFP29279 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms