Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.11■□□□□ 0.33
GDF1P27539 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.11■□□□□ 0.33
GDF1P27539 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.11■□□□□ 0.33
GDF1P27539 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.11■□□□□ 0.33
GDF1P27539 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.11■□□□□ 0.33
GDF1P27539 AL023973.1-201ENST00000624619 620 ntBASIC17.11■□□□□ 0.33
GDF1P27539 AL031432.5-201ENST00000641059 760 ntBASIC17.11■□□□□ 0.33
GDF1P27539 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 FP475955.4-201ENST00000623131 1990 ntBASIC17.11■□□□□ 0.33
GDF1P27539 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GDF1P27539 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GDF1P27539 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.1■□□□□ 0.33
GDF1P27539 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GDF1P27539 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 AL023284.2-201ENST00000405850 579 ntBASIC17.1■□□□□ 0.33
GDF1P27539 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.1■□□□□ 0.33
GDF1P27539 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GDF1P27539 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 AC022616.7-201ENST00000525383 220 ntBASIC17.1■□□□□ 0.33
GDF1P27539 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 WWOX-216ENST00000569818 525 ntBASIC17.1■□□□□ 0.33
GDF1P27539 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 NTF6B-201ENST00000591913 560 ntBASIC17.1■□□□□ 0.33
GDF1P27539 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.1■□□□□ 0.33
GDF1P27539 CR769767.2-201ENST00000622735 460 ntBASIC17.1■□□□□ 0.33
GDF1P27539 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GDF1P27539 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GDF1P27539 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GDF1P27539 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.1■□□□□ 0.33
GDF1P27539 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.1■□□□□ 0.33
GDF1P27539 AC036111.1-201ENST00000533973 1582 ntBASIC17.1■□□□□ 0.33
GDF1P27539 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF1P27539 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GDF1P27539 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GDF1P27539 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF1P27539 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF1P27539 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GDF1P27539 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.09■□□□□ 0.33
GDF1P27539 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF1P27539 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF1P27539 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF1P27539 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.09■□□□□ 0.33
GDF1P27539 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF1P27539 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GDF1P27539 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GDF1P27539 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDF1P27539 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDF1P27539 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GDF1P27539 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.08■□□□□ 0.33
GDF1P27539 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF1P27539 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GDF1P27539 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDF1P27539 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDF1P27539 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDF1P27539 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.08■□□□□ 0.32
GDF1P27539 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF1P27539 TSPY5P-201ENST00000426936 936 ntBASIC17.08■□□□□ 0.32
GDF1P27539 AC063952.2-201ENST00000498792 1227 ntBASIC17.08■□□□□ 0.32
GDF1P27539 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF1P27539 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms