Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.45■□□□□ 0.38
PEPDP12955 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PEPDP12955 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 AL160286.2-201ENST00000567150 934 ntBASIC17.45■□□□□ 0.38
PEPDP12955 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.45■□□□□ 0.38
PEPDP12955 REXO1L10P-201ENST00000615707 1290 ntBASIC17.45■□□□□ 0.38
PEPDP12955 REXO1L12P-201ENST00000622156 912 ntBASIC17.45■□□□□ 0.38
PEPDP12955 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PEPDP12955 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.45■□□□□ 0.38
PEPDP12955 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PEPDP12955 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PEPDP12955 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PEPDP12955 AC005082.1-201ENST00000413042 2259 ntBASIC17.45■□□□□ 0.38
PEPDP12955 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
PEPDP12955 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
PEPDP12955 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PEPDP12955 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PEPDP12955 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PEPDP12955 SDHAP1-207ENST00000440850 2000 ntBASIC17.44■□□□□ 0.38
PEPDP12955 AC104417.2-201ENST00000562989 1793 ntBASIC17.44■□□□□ 0.38
PEPDP12955 UNC93B2-201ENST00000285383 730 ntBASIC17.44■□□□□ 0.38
PEPDP12955 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.44■□□□□ 0.38
PEPDP12955 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.44■□□□□ 0.38
PEPDP12955 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 MIR6786-201ENST00000616843 113 ntBASIC17.44■□□□□ 0.38
PEPDP12955 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.44■□□□□ 0.38
PEPDP12955 CROCCP3-202ENST00000420820 1947 ntBASIC17.44■□□□□ 0.38
PEPDP12955 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PEPDP12955 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PEPDP12955 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PEPDP12955 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.43■□□□□ 0.38
PEPDP12955 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.43■□□□□ 0.38
PEPDP12955 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 BX088651.1-201ENST00000540551 451 ntBASIC17.43■□□□□ 0.38
PEPDP12955 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.43■□□□□ 0.38
PEPDP12955 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.43■□□□□ 0.38
PEPDP12955 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.43■□□□□ 0.38
PEPDP12955 AC073912.3-201ENST00000624414 853 ntBASIC17.43■□□□□ 0.38
PEPDP12955 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PEPDP12955 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PEPDP12955 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PEPDP12955 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PEPDP12955 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
PEPDP12955 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.42■□□□□ 0.38
PEPDP12955 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.42■□□□□ 0.38
PEPDP12955 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.42■□□□□ 0.38
PEPDP12955 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PEPDP12955 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PEPDP12955 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms