Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RB1P06400 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.94■□□□□ 0.78
RB1P06400 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
RB1P06400 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.93■□□□□ 0.78
RB1P06400 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.93■□□□□ 0.78
RB1P06400 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 IGHV3-47-201ENST00000425060 335 ntBASIC19.93■□□□□ 0.78
RB1P06400 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.93■□□□□ 0.78
RB1P06400 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RB1P06400 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.93■□□□□ 0.78
RB1P06400 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RB1P06400 GPR32P1-201ENST00000601788 811 ntBASIC19.93■□□□□ 0.78
RB1P06400 AC064862.7-201ENST00000604520 867 ntBASIC19.93■□□□□ 0.78
RB1P06400 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RB1P06400 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 HLA-A-201ENST00000376802 1334 ntBASIC19.93■□□□□ 0.78
RB1P06400 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RB1P06400 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RB1P06400 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RB1P06400 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.93■□□□□ 0.78
RB1P06400 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.93■□□□□ 0.78
RB1P06400 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.93■□□□□ 0.78
RB1P06400 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.93■□□□□ 0.78
RB1P06400 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.93■□□□□ 0.78
RB1P06400 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
RB1P06400 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.92■□□□□ 0.78
RB1P06400 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.92■□□□□ 0.78
RB1P06400 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 GUSBP12-201ENST00000513727 720 ntBASIC19.92■□□□□ 0.78
RB1P06400 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
RB1P06400 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RB1P06400 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RB1P06400 GABARAPL3-202ENST00000624044 1851 ntBASIC19.92■□□□□ 0.78
RB1P06400 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 LINC00167-201ENST00000530583 1419 ntBASIC19.92■□□□□ 0.78
RB1P06400 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RB1P06400 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RB1P06400 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.91■□□□□ 0.78
RB1P06400 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.91■□□□□ 0.78
RB1P06400 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.91■□□□□ 0.78
RB1P06400 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 RCC2P3-201ENST00000418112 1537 ntBASIC19.91■□□□□ 0.78
RB1P06400 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RB1P06400 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RB1P06400 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.9■□□□□ 0.78
RB1P06400 AL512353.2-201ENST00000448759 1962 ntBASIC19.9■□□□□ 0.78
RB1P06400 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.9■□□□□ 0.78
RB1P06400 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.9■□□□□ 0.78
RB1P06400 MIR564-202ENST00000385049 94 ntBASIC19.9■□□□□ 0.78
RB1P06400 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.9■□□□□ 0.78
RB1P06400 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.9■□□□□ 0.78
RB1P06400 SAPCD2P3-201ENST00000455031 850 ntBASIC19.9■□□□□ 0.78
RB1P06400 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RB1P06400 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.9■□□□□ 0.78
RB1P06400 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.9■□□□□ 0.78
RB1P06400 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.9■□□□□ 0.78
RB1P06400 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms