Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQB1P01920 AC135776.1-201ENST00000319817 2481 ntBASIC16.3■□□□□ 0.2
HLA-DQB1P01920 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 DUX4L16-201ENST00000555130 1264 ntBASIC16.3■□□□□ 0.2
HLA-DQB1P01920 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQB1P01920 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 MIR6821-201ENST00000617625 74 ntBASIC16.29■□□□□ 0.2
HLA-DQB1P01920 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQB1P01920 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 AL139384.1-201ENST00000612143 3047 ntBASIC16.28■□□□□ 0.2
HLA-DQB1P01920 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 AL589743.5-201ENST00000616611 1050 ntBASIC16.28■□□□□ 0.2
HLA-DQB1P01920 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DQB1P01920 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQB1P01920 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms