Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX58O95786 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX58O95786 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX58O95786 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 AL671277.2-201ENST00000458060 996 ntBASIC23.81■■□□□ 1.4
DDX58O95786 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX58O95786 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.81■■□□□ 1.4
DDX58O95786 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX58O95786 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX58O95786 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX58O95786 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
DDX58O95786 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
DDX58O95786 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX58O95786 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX58O95786 AC034232.1-201ENST00000506026 1064 ntBASIC23.8■■□□□ 1.4
DDX58O95786 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 AC024243.1-201ENST00000609234 778 ntBASIC23.8■■□□□ 1.4
DDX58O95786 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX58O95786 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX58O95786 AC112497.1-201ENST00000624824 639 ntBASIC23.8■■□□□ 1.4
DDX58O95786 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX58O95786 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
DDX58O95786 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.8■■□□□ 1.4
DDX58O95786 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX58O95786 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX58O95786 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.79■■□□□ 1.4
DDX58O95786 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
DDX58O95786 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
DDX58O95786 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.79■■□□□ 1.4
DDX58O95786 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.79■■□□□ 1.4
DDX58O95786 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
DDX58O95786 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX58O95786 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.79■■□□□ 1.4
DDX58O95786 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
DDX58O95786 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX58O95786 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX58O95786 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX58O95786 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DDX58O95786 AC005332.7-201ENST00000614046 2005 ntBASIC23.78■■□□□ 1.4
DDX58O95786 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX58O95786 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.78■■□□□ 1.4
DDX58O95786 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.78■■□□□ 1.4
DDX58O95786 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
DDX58O95786 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX58O95786 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX58O95786 AL121956.5-201ENST00000625261 221 ntBASIC23.78■■□□□ 1.4
DDX58O95786 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX58O95786 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX58O95786 KRT8P7-201ENST00000533003 1432 ntBASIC23.77■■□□□ 1.4
DDX58O95786 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
DDX58O95786 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX58O95786 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX58O95786 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
DDX58O95786 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 MIR564-202ENST00000385049 94 ntBASIC23.77■■□□□ 1.4
DDX58O95786 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX58O95786 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.77■■□□□ 1.4
DDX58O95786 AC112907.2-201ENST00000448639 330 ntBASIC23.77■■□□□ 1.4
DDX58O95786 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX58O95786 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms