Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC29.42■■■□□ 2.3
PCF11O94913 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
PCF11O94913 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
PCF11O94913 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC29.42■■■□□ 2.3
PCF11O94913 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.42■■■□□ 2.3
PCF11O94913 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC29.42■■■□□ 2.3
PCF11O94913 TPSP2-201ENST00000561760 610 ntBASIC29.42■■■□□ 2.3
PCF11O94913 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC29.42■■■□□ 2.3
PCF11O94913 AC016734.2-201ENST00000624325 1377 ntBASIC29.42■■■□□ 2.3
PCF11O94913 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCF11O94913 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC29.41■■■□□ 2.3
PCF11O94913 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC29.41■■■□□ 2.3
PCF11O94913 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCF11O94913 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCF11O94913 GRAMD4P1-201ENST00000435181 1110 ntBASIC29.41■■■□□ 2.3
PCF11O94913 FEM1AP3-201ENST00000403722 1741 ntBASIC29.41■■■□□ 2.3
PCF11O94913 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
PCF11O94913 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC29.41■■■□□ 2.3
PCF11O94913 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
PCF11O94913 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCF11O94913 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCF11O94913 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
PCF11O94913 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
PCF11O94913 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC29.4■■■□□ 2.3
PCF11O94913 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC29.4■■■□□ 2.3
PCF11O94913 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC29.4■■■□□ 2.3
PCF11O94913 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC29.4■■■□□ 2.3
PCF11O94913 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCF11O94913 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC29.39■■■□□ 2.3
PCF11O94913 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCF11O94913 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCF11O94913 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCF11O94913 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
PCF11O94913 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC29.39■■■□□ 2.3
PCF11O94913 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC29.39■■■□□ 2.3
PCF11O94913 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC29.39■■■□□ 2.3
PCF11O94913 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
PCF11O94913 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC29.39■■■□□ 2.3
PCF11O94913 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC29.39■■■□□ 2.3
PCF11O94913 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC29.39■■■□□ 2.3
PCF11O94913 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC29.39■■■□□ 2.3
PCF11O94913 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCF11O94913 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC29.39■■■□□ 2.29
PCF11O94913 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
PCF11O94913 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC29.39■■■□□ 2.29
PCF11O94913 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.39■■■□□ 2.29
PCF11O94913 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
PCF11O94913 LITAF-220ENST00000620789 692 ntTSL 5 BASIC29.39■■■□□ 2.29
PCF11O94913 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PCF11O94913 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCF11O94913 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCF11O94913 UBC-206ENST00000538617 1303 ntTSL 5 BASIC29.38■■■□□ 2.29
PCF11O94913 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
PCF11O94913 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCF11O94913 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC29.38■■■□□ 2.29
PCF11O94913 CHCHD2P8-201ENST00000429873 447 ntBASIC29.38■■■□□ 2.29
PCF11O94913 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC29.38■■■□□ 2.29
PCF11O94913 TSSC2-201ENST00000450217 709 ntBASIC29.38■■■□□ 2.29
PCF11O94913 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC29.38■■■□□ 2.29
PCF11O94913 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC29.38■■■□□ 2.29
PCF11O94913 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC29.37■■■□□ 2.29
PCF11O94913 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PCF11O94913 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
PCF11O94913 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC29.37■■■□□ 2.29
PCF11O94913 AC111152.3-201ENST00000569699 673 ntBASIC29.37■■■□□ 2.29
PCF11O94913 AL121672.3-201ENST00000608644 468 ntBASIC29.37■■■□□ 2.29
PCF11O94913 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC29.37■■■□□ 2.29
PCF11O94913 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCF11O94913 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PCF11O94913 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC29.36■■■□□ 2.29
PCF11O94913 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
PCF11O94913 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms