Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 CD63-204ENST00000546939 779 ntTSL 3 BASIC26.56■■□□□ 1.84
NPHP4O75161 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
NPHP4O75161 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC26.56■■□□□ 1.84
NPHP4O75161 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
NPHP4O75161 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.56■■□□□ 1.84
NPHP4O75161 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
NPHP4O75161 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
NPHP4O75161 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.55■■□□□ 1.84
NPHP4O75161 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC26.55■■□□□ 1.84
NPHP4O75161 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC26.55■■□□□ 1.84
NPHP4O75161 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.55■■□□□ 1.84
NPHP4O75161 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC26.55■■□□□ 1.84
NPHP4O75161 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
NPHP4O75161 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC26.55■■□□□ 1.84
NPHP4O75161 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC26.55■■□□□ 1.84
NPHP4O75161 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NPHP4O75161 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.54■■□□□ 1.84
NPHP4O75161 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
NPHP4O75161 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.54■■□□□ 1.84
NPHP4O75161 RCC2P3-201ENST00000418112 1537 ntBASIC26.54■■□□□ 1.84
NPHP4O75161 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 ENSA-205ENST00000361532 792 ntTSL 2 BASIC26.54■■□□□ 1.84
NPHP4O75161 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 YBX2P1-201ENST00000394192 760 ntBASIC26.54■■□□□ 1.84
NPHP4O75161 LBH-204ENST00000406087 559 ntTSL 4 BASIC26.54■■□□□ 1.84
NPHP4O75161 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC26.54■■□□□ 1.84
NPHP4O75161 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.54■■□□□ 1.84
NPHP4O75161 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NPHP4O75161 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC26.53■■□□□ 1.84
NPHP4O75161 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.53■■□□□ 1.84
NPHP4O75161 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 AC132008.2-207ENST00000454517 770 ntBASIC26.53■■□□□ 1.84
NPHP4O75161 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.53■■□□□ 1.84
NPHP4O75161 AC034105.1-201ENST00000563488 319 ntBASIC26.53■■□□□ 1.84
NPHP4O75161 MIR3180-4-201ENST00000582223 153 ntBASIC26.53■■□□□ 1.84
NPHP4O75161 AC008556.1-201ENST00000610908 2040 ntBASIC26.53■■□□□ 1.84
NPHP4O75161 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPHP4O75161 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
NPHP4O75161 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
NPHP4O75161 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC26.52■■□□□ 1.84
NPHP4O75161 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.52■■□□□ 1.84
NPHP4O75161 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
NPHP4O75161 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC26.52■■□□□ 1.84
NPHP4O75161 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC26.52■■□□□ 1.84
NPHP4O75161 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPHP4O75161 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPHP4O75161 KRT89P-201ENST00000620027 1478 ntBASIC26.51■■□□□ 1.83
NPHP4O75161 RPS8P6-201ENST00000426177 609 ntBASIC26.51■■□□□ 1.83
NPHP4O75161 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
NPHP4O75161 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NPHP4O75161 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC26.51■■□□□ 1.83
NPHP4O75161 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.51■■□□□ 1.83
NPHP4O75161 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.51■■□□□ 1.83
NPHP4O75161 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPHP4O75161 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPHP4O75161 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC26.51■■□□□ 1.83
NPHP4O75161 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPHP4O75161 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC26.51■■□□□ 1.83
NPHP4O75161 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 TREX1-205ENST00000625293 1783 ntBASIC26.5■■□□□ 1.83
NPHP4O75161 IMP4-203ENST00000409935 958 ntTSL 5 BASIC26.5■■□□□ 1.83
NPHP4O75161 RBM17P3-201ENST00000417687 1192 ntBASIC26.5■■□□□ 1.83
NPHP4O75161 THAP5-204ENST00000438865 868 ntTSL 2 BASIC26.5■■□□□ 1.83
NPHP4O75161 AL591424.1-201ENST00000442569 1213 ntBASIC26.5■■□□□ 1.83
NPHP4O75161 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
NPHP4O75161 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
NPHP4O75161 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC26.5■■□□□ 1.83
NPHP4O75161 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
NPHP4O75161 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP4O75161 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC26.5■■□□□ 1.83
NPHP4O75161 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NPHP4O75161 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
NPHP4O75161 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms