Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 FAM201B-201ENST00000458407 597 ntBASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 ITM2C-210ENST00000620962 501 ntBASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 FAM197Y4-202ENST00000622692 608 ntBASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 AC020763.4-201ENST00000623414 4170 ntBASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 AC135050.7-201ENST00000624508 2218 ntBASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM49BA6NDI0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 PRORSD1P-201ENST00000295112 541 ntBASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 AC004951.3-201ENST00000418645 1148 ntBASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 AC011506.1-201ENST00000474329 610 ntBASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM49BA6NDI0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AL353807.1-201ENST00000427475 662 ntBASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 PRSS44-201ENST00000515154 1146 ntBASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 RARRES2P10-201ENST00000564312 460 ntBASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AC011298.2-201ENST00000617989 482 ntBASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 AC068587.9-201ENST00000641814 219 ntBASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM49BA6NDI0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 KRT18P29-201ENST00000397031 1267 ntBASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 AC098590.1-201ENST00000468126 897 ntBASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms