Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 TSPY14P-201ENST00000303979 915 ntBASIC17.93■□□□□ 0.46
LRIT2A6NDA9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.93■□□□□ 0.46
LRIT2A6NDA9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 AL353719.1-201ENST00000566847 864 ntBASIC17.93■□□□□ 0.46
LRIT2A6NDA9 AL031598.1-201ENST00000561511 1773 ntBASIC17.93■□□□□ 0.46
LRIT2A6NDA9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 RCC2P3-201ENST00000418112 1537 ntBASIC17.93■□□□□ 0.46
LRIT2A6NDA9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRIT2A6NDA9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 CCR12P-201ENST00000446203 998 ntBASIC17.92■□□□□ 0.46
LRIT2A6NDA9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 AC010947.1-201ENST00000623454 693 ntBASIC17.92■□□□□ 0.46
LRIT2A6NDA9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.92■□□□□ 0.46
LRIT2A6NDA9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 AC092338.2-201ENST00000568827 1415 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 EGLN1P1-201ENST00000531623 762 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 NAPSB-206ENST00000562112 1266 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 AC116562.4-202ENST00000641738 218 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 Z98044.1-201ENST00000632503 1764 ntBASIC17.91■□□□□ 0.46
LRIT2A6NDA9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LRIT2A6NDA9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 AL109659.2-201ENST00000606809 1674 ntBASIC17.9■□□□□ 0.46
LRIT2A6NDA9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 AL023284.2-201ENST00000405850 579 ntBASIC17.9■□□□□ 0.46
LRIT2A6NDA9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms