Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 MIR564-202ENST00000385049 94 ntBASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 GPR32P1-201ENST00000601788 811 ntBASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
LOC102724428A0A0B4J2F2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 AP000593.1-201ENST00000393668 712 ntBASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 AL592071.1-201ENST00000611956 408 ntBASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 BX640515.1-201ENST00000617215 977 ntBASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.99■■□□□ 1.43
LOC102724428A0A0B4J2F2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 IGHGP-201ENST00000390555 1178 ntBASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 RN7SL606P-201ENST00000472779 293 ntBASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 AC120114.3-201ENST00000611923 658 ntBASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 TEX21P-204ENST00000641479 1693 ntBASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 Z82202.1-201ENST00000623446 1880 ntBASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LOC102724428A0A0B4J2F2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LOC102724428A0A0B4J2F2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LOC102724428A0A0B4J2F2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LOC102724428A0A0B4J2F2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LOC102724428A0A0B4J2F2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LOC102724428A0A0B4J2F2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LOC102724428A0A0B4J2F2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LOC102724428A0A0B4J2F2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms