Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 AC069148.1-201ENST00000608741 768 ntBASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV19A0A0A6YYK7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV19A0A0A6YYK7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 HBZP1-201ENST00000354915 429 ntBASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 IRX1P1-201ENST00000438849 1838 ntBASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV19A0A0A6YYK7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 SEC1P-202ENST00000473944 940 ntBASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 AC092597.1-201ENST00000487352 616 ntBASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 AL158211.5-201ENST00000623583 2518 ntBASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
TRAV19A0A0A6YYK7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV19A0A0A6YYK7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 AC141586.3-201ENST00000562166 1838 ntBASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRAV19A0A0A6YYK7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms