Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-3Q9BYR4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU4-58P-201ENST00000363192 141 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 Y_RNA.109-201ENST00000363215 102 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RNA5SP126-201ENST00000365092 109 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RNY4P13-201ENST00000384284 96 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR136-201ENST00000385207 82 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 CKS1BP5-201ENST00000434172 273 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 AC097635.1-201ENST00000450678 155 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA4.4-201ENST00000515921 135 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-287P-201ENST00000516230 98 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RNA5SP67-201ENST00000516422 131 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA64.4-201ENST00000516632 81 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR548AG1-201ENST00000579932 66 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR4433B-201ENST00000581329 102 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RPL12P50-201ENST00000603116 116 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 AC090617.8-201ENST00000623339 167 ntBASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KRTAP4-3Q9BYR4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 Y_RNA.134-201ENST00000363435 105 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA33.1-201ENST00000364957 130 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA8-201ENST00000384574 139 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-1197P-201ENST00000391183 107 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 RHEBP3-201ENST00000411920 351 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 AL031183.1-201ENST00000457667 207 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 snoU13.13-201ENST00000458842 104 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD123-201ENST00000459473 70 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA70.16-201ENST00000516390 95 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR514B-201ENST00000516774 80 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA4-201ENST00000584302 138 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR4765-201ENST00000585007 77 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 AC104984.5-201ENST00000586878 94 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 AC108676.2-201ENST00000605225 163 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU7-10P-201ENST00000607194 63 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR548O2-201ENST00000616090 70 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 U2.18-201ENST00000622185 84 ntBASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-3Q9BYR4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AC027290.2-201ENST00000623210 18662 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AC062016.1-201ENST00000355719 319 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR148B-201ENST00000362252 99 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-833P-201ENST00000363486 107 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 Y_RNA.165-201ENST00000363721 102 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-53P-201ENST00000365367 106 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD38B-201ENST00000384690 67 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR363-201ENST00000384840 75 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR452-201ENST00000385020 85 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR216B-201ENST00000390186 82 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 RNU6-1077P-201ENST00000410506 102 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AC087499.2-201ENST00000432861 149 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AC105272.1-201ENST00000438604 198 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AL445193.1-201ENST00000441183 141 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AL021921.1-201ENST00000442774 93 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 HMGN2P16-201ENST00000456802 261 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD109B-201ENST00000458961 67 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORD109A-201ENST00000459128 67 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 RN7SL75P-201ENST00000461926 281 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 RN7SL330P-201ENST00000469709 307 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 TRBV12-1-201ENST00000479785 344 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AL163195.1-201ENST00000496941 348 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 RNA5SP217-201ENST00000515959 91 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA25.16-201ENST00000516741 121 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 SNORA44.1-201ENST00000517031 108 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 MIR548H5-201ENST00000580314 60 ntBASIC0.97□□□□□ -2.25
KRTAP4-3Q9BYR4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms